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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57203.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  119/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.18.1
:268 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->184 2d3yA PDBj 3e-46 60.7 %
:RPS:PDB   24->186 2d3yA PDBj 6e-24 56.9 %
:RPS:SCOP  66->184 1mtlA  c.18.1.2 * 2e-16 17.4 %
:HMM:SCOP  34->185 1l9gA_ c.18.1.2 * 4.7e-32 42.1 %
:HMM:PFM   67->186 PF03167 * UDG 1.6e-21 38.8 103/150  
:BLT:SWISS 24->191 Y1289_MYCBO 2e-56 60.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57203.1 GT:GENE BAD57203.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2520786..2521592) GB:FROM 2520786 GB:TO 2521592 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57203.1 LENGTH 268 SQ:AASEQ MPSGTRPPPVPRAGAAPARARYRSIADLDADIAACRACPRLVRWRELVAETKRAAFRDETYWGRPVPGFGPDDARLLLVGLAPAAHGGNRTGRMFTGDRSGDVLFAALHAVGLANQPTAVHPGDGLRLLGARVTAPVHCAPPDNKPTVTERDRCRGWLDVELGLLAPTVRAIVVLGGFGWQALLPALAEAGWAVPRPPEVRARGAGAAGTGRRGPRAARAVRLLPRQPAEHLHRQADPGDARSRAGRGRRRRRTADHVVSDCTERARR GT:EXON 1|1-268:0| BL:SWS:NREP 1 BL:SWS:REP 24->191|Y1289_MYCBO|2e-56|60.7|168/268| SEG 6->23|rpppvpragaapararyr| SEG 193->229|avprppevrargagaagtgrrgpraaravrllprqpa| SEG 236->256|adpgdarsragrgrrrrrtad| BL:PDB:NREP 1 BL:PDB:REP 32->184|2d3yA|3e-46|60.7|150/219| RP:PDB:NREP 1 RP:PDB:REP 24->186|2d3yA|6e-24|56.9|160/219| HM:PFM:NREP 1 HM:PFM:REP 67->186|PF03167|1.6e-21|38.8|103/150|UDG| RP:SCP:NREP 1 RP:SCP:REP 66->184|1mtlA|2e-16|17.4|109/157|c.18.1.2| HM:SCP:REP 34->185|1l9gA_|4.7e-32|42.1|133/191|c.18.1.2|1/1|Uracil-DNA glycosylase-like| OP:NHOMO 141 OP:NHOMOORG 141 OP:PATTERN ------1111111111-11--11-----11-1-----------------------------111--11 11111----------1111-11111111111111111-11111111---------1----111111111-------------1--------------------------------------------------------11----1-------11-------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------111111111111111111111111111111111---------111-------------11111------------------111--111-----------------------------1--111----------------------------------------------------1------------111--1----------------------1-111111---------------------------------------------------------------1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 61.6 SQ:SECSTR #######################cHHHHHHHHTTccccHHHHHHHHHTTTTcGG#GTTccccccccccEEcTTccEEEEEccccTTTHHHHccTTTTcHHHHHHHHHHHHTTcccccccccTTcccccccEEEEEccccccGGGcccHHHHHHHHHHHHHHHHTccTTccEEEEEcHHHHHHHHHHcGG############################################################################### DISOP:02AL 1-7, 244-252, 266-268| PSIPRED ccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccccHHHcccccccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEcEEcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHcccccccEEEcccEEEEEEEcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //