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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57206.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:204 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->106 3cwrB PDBj 1e-06 26.4 %
:RPS:PDB   19->196 3crjB PDBj 3e-11 15.9 %
:RPS:SCOP  19->76 1z77A1  a.4.1.9 * 6e-10 19.0 %
:HMM:SCOP  14->79 2id3A1 a.4.1.9 * 1.6e-09 30.3 %
:HMM:PFM   37->68 PF00440 * TetR_N 7.4e-10 40.6 32/47  
:BLT:SWISS 21->80 YCNC_BACSU 4e-05 38.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57206.1 GT:GENE BAD57206.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2522429..2523043) GB:FROM 2522429 GB:TO 2523043 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57206.1 LENGTH 204 SQ:AASEQ MTTPPRPAGTRSPGRPASATRQEVVALARRAFLAGERVDVQAIAAELGLSRASIYRWFGSRDGLLGAMLVQEYEQMIAKADAKCRARGGRRILDVLDRVARWEAVNEPFRRYFENEPMSGLRILTASDGPVQPRAVAAVAELISRVETEDGYQPPLERDLLAYTLVRIGEAFLYTDTAAGIRNDVDRLREVYSVLVGLVPPTSG GT:EXON 1|1-204:0| BL:SWS:NREP 1 BL:SWS:REP 21->80|YCNC_BACSU|4e-05|38.3|60/292| BL:PDB:NREP 1 BL:PDB:REP 16->106|3cwrB|1e-06|26.4|91/187| RP:PDB:NREP 1 RP:PDB:REP 19->196|3crjB|3e-11|15.9|176/183| HM:PFM:NREP 1 HM:PFM:REP 37->68|PF00440|7.4e-10|40.6|32/47|TetR_N| RP:SCP:NREP 1 RP:SCP:REP 19->76|1z77A1|6e-10|19.0|58/75|a.4.1.9| HM:SCP:REP 14->79|2id3A1|1.6e-09|30.3|66/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 4 OP:NHOMOORG 3 OP:PATTERN -------------------------------------------------------------------- ------------------------------------12--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 204 STR:RPRED 100.0 SQ:SECSTR ccTccccHHHHHccccHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHcccHHHHHTTcccHHHHHHHHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHTGGGGcGGGHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHHHHTTcTHHHHHHHHHHHHHHHHHccccc DISOP:02AL 1-19, 202-204| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccc //