[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57207.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  879/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:253 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->250 2p68A PDBj 1e-53 46.0 %
:RPS:PDB   7->250 1dohB PDBj 5e-46 29.1 %
:RPS:SCOP  8->250 1pwxA  c.2.1.2 * 4e-53 24.9 %
:HMM:SCOP  1->250 1zemA1 c.2.1.2 * 2e-85 45.4 %
:RPS:PFM   7->173 PF00106 * adh_short 2e-27 49.1 %
:HMM:PFM   8->171 PF00106 * adh_short 1.7e-39 32.5 160/167  
:BLT:SWISS 7->250 FABG_PSEAE 4e-55 46.8 %
:PROS 141->169|PS00061|ADH_SHORT

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57207.1 GT:GENE BAD57207.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2523168..2523929 GB:FROM 2523168 GB:TO 2523929 GB:DIRECTION + GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID BAD57207.1 LENGTH 253 SQ:AASEQ MSASTSRTAIVTGSARGIGAATARRLAADGFAVAVLDLEESAAGPVVGEIEAAGGRALAVGVDVADEQSVDAAVQRVASELGAPTVLVNNAGITRDNLLFKMSVQDWDAVMNVHLRGSFLMSRAAQKYMTEAKWGRIVNLSSTSALGNRGQANYSAAKAGLQGFTKTLAIELGKFGVTVNAIAPGFIETDMTAATAERLGIPFEQFREAAAKQIPVGRTGTPEDIAHTVSFLVSEGAGFVSGQVVYVAGGPTA GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 7->250|FABG_PSEAE|4e-55|46.8|237/247| PROS 141->169|PS00061|ADH_SHORT|PDOC00060| BL:PDB:NREP 1 BL:PDB:REP 7->250|2p68A|1e-53|46.0|237/248| RP:PDB:NREP 1 RP:PDB:REP 7->250|1dohB|5e-46|29.1|244/271| RP:PFM:NREP 1 RP:PFM:REP 7->173|PF00106|2e-27|49.1|167/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 8->171|PF00106|1.7e-39|32.5|160/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 8->250|1pwxA|4e-53|24.9|237/252|c.2.1.2| HM:SCP:REP 1->250|1zemA1|2e-85|45.4|249/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 20905 OP:NHOMOORG 1130 OP:PATTERN 2221246BB9B9A99719243121D44B8A7D22---------21154--622-23123243954156 MKi5*41877F695z**aa-a*55**aZaaaq********7*H*aQHC7JF3XPTE5H11TRj6YQlppeF111132322A8c1143387A728331--B6a5GH*EfCO111111111111114767BG864C97KMMRP222NDJGKICB88844433864595HNGgB133333254333LE9CD771LAUIIJIJNJMIJMJMMLRJTTJSIKKCIJPOKD988897On855555435555554BBBEDB3D3AC36131BE55AA8987BB99777877674454444445444446556667666664553325559535AD5554444547A56627967341198322B7123325333355523G2LzPPg12332XI*vv79DibfeVMNONLMOMOOd-QTZQNzNbh*s2*ssTyn******flNVJRVcULSVQKUFFFFFFFFWVUGBEIF22222333221222331221222122221BL**TAMrhWm******bYYZUww**cccbCZ*i*e**r49XZQNHQLLiPmU*wAJE5B8FF4233222237BPMBAW7I422213433427BA6G7695ADDDZb35254434422532422222224342487DC9CIHHANF67BAAC8FFCAA8F9EB99F1-3457B111111ELIJ7NAEHHFEEEEFF-HFFGGDEDGEHEGEEEFEEScTLA9BCDABCCDDCDDBBCBCDWDEBDCBD61ABBBBBBABBBB111A78667FFEF4MOOK222938233323573UVUYWFNAGBS9deaaOVdpSPQWTNVRT7564465454556I65665CC79AORQLRKICDF96761266HHA999--------1-4----2---3-1------3-------34421666764I4 1111SQN-A3316EFx*wr*mxk****TUHNKLRROOYOTMTUMMJkdnz****fkfUSQMODBL6683F42LBH33223AEEDHF6C-V*Q*NqLKIKHIEKOMG-NbF*muaYdRFBHAJYFoY9aFw*e-WWlHIKEfGOfPELFDDY6AXMVNfux*cIwjeOVQerOide9KE8*366HbQji*quNKJkSVVG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 100.0 SQ:SECSTR GGGGTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHGGGTccHHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGGGTTccccEEEEcccGGG DISOP:02AL 1-4| PSIPRED cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHccccEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccEEEEEcccccc //