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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57209.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:510 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   29->392 3cnsA PDBj 2e-04 9.0 %
:HMM:SCOP  1->311 1ltxR1 c.3.1.3 * 1.1e-31 30.2 %
:HMM:PFM   17->312 PF01593 * Amino_oxidase 2.7e-11 21.0 271/449  
:BLT:SWISS 6->485 Y921_MYCBO 5e-98 48.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57209.1 GT:GENE BAD57209.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2524513..2526045 GB:FROM 2524513 GB:TO 2526045 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57209.1 LENGTH 510 SQ:AASEQ MTRGSYDVVVVGGGHNGLVAAAYLAGAGRSVLVLERLDHTGGAAVSQRPFPGVDARVSRYSYLVSLLPERIVRDLGLRFHTRRRRISSYTPVGSGGLLVDTADPARTRTSFRELTGSDREFEAWQRFYAATARLAHRVFPTLTEPLPTRAELRARVDDDRTWAAVFERPLGEALTATFADDTVRGIVCTDALIGTFTHGEDPTLRQNRCFLYHVIGGGTGDWTVPVGGMGALTSALADAARAAGAEIRTGTAVTGIDSDGRTAEVRYDGGAVGAGHVLVNAAPRELDRLLGRAPGAEPEGSQLKINMVVRRLPRLRDTAVDPRDAFAGTFHVAESYRELDAAYRSAAHGRMPAVLPSELYCHTLTDPSILTGDAAGMHTLTLFGLHTPARLFRDDPEAARAAALRSALAGLDAVLAEPLADCLAEDAEGRPCLEVRSPLDLERELGLPGGHIFHGDLEFPWRATEADDSAHRWGVATGVPNVLCCGAGAVRGGGVSGIGGHNAAMAVLDR GT:EXON 1|1-510:0| BL:SWS:NREP 1 BL:SWS:REP 6->485|Y921_MYCBO|5e-98|48.4|473/535| SEG 8->14|vvvvggg| SEG 17->28|glvaaaylagag| SEG 230->252|galtsaladaaraagaeirtgta| SEG 393->413|rddpeaaraaalrsalaglda| SEG 486->504|gagavrgggvsgigghnaa| RP:PDB:NREP 1 RP:PDB:REP 29->392|3cnsA|2e-04|9.0|332/492| HM:PFM:NREP 1 HM:PFM:REP 17->312|PF01593|2.7e-11|21.0|271/449|Amino_oxidase| HM:SCP:REP 1->311|1ltxR1|1.1e-31|30.2|295/501|c.3.1.3|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 70 OP:NHOMOORG 64 OP:PATTERN -------------------------------------------------------------------- -1--1---------11111-11--1211111111111--------1-----1--1-----1-1-1--111---------------------------------------------------------------------------1--------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-----------------------------1------------------------------------------------------------------11-1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1---1211---------1-------------------1--------1-111-122-2-------1-------------1121--1--1-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 332 STR:RPRED 65.1 SQ:SECSTR ############################ccEEEEcccccccTTccEEEcGGGc##EEEccccEEccTTTcHHHHHHHHHHHHHccccEEcc##########################ccccEEEETTTEEcTTcTTTcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHTGGGccHHHHHHHHHHGGGGH##HHHTccTTTccHHHHcc##ccccccEEEccTHHHHHHHHTTccGGGEETTccEEEEEEETTTEEEEEEccccEEEEEEEEEcccHHHHHGGGccccccTTcEEccccHHHHHHGGGcEEEccEccccccEEEEcccccHHHHHHHHHcccHHHHHHHHHcccccTTcccEEEEEHHHcccEEEEEEccTHHHHH###################################################################################################################### DISOP:02AL 1-3| PSIPRED ccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccccccEEEEEcccccccccccHHHHHHccHHHHHHHccccccccccccccEEEcccccEEEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEccEEEEccEEEEEccHHHHHHHHccccccccccccEEEEEEEEccccccccccccccccccEEEEcccHHHHHHHHHHHHccccccccEEEEEEccccccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccEEEEEccHHHHHHHccccccccccccccccHHHccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHcc //