[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57224.1
DDBJ      :             putative esterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:339 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->338 1f0nA PDBj 5e-24 29.7 %
:RPS:PDB   47->261 3e4dD PDBj 1e-26 18.6 %
:RPS:SCOP  43->251 1pv1A  c.69.1.34 * 1e-25 21.3 %
:HMM:SCOP  42->339 1pv1A_ c.69.1.34 * 7.3e-25 28.1 %
:RPS:PFM   73->255 PF00756 * Esterase 1e-15 40.6 %
:HMM:PFM   51->327 PF00756 * Esterase 6.2e-37 33.3 225/252  
:BLT:SWISS 45->337 CSP1_CORML 6e-40 35.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57224.1 GT:GENE BAD57224.1 GT:PRODUCT putative esterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2537694..2538713 GB:FROM 2537694 GB:TO 2538713 GB:DIRECTION + GB:PRODUCT putative esterase GB:PROTEIN_ID BAD57224.1 LENGTH 339 SQ:AASEQ MDPRRNRALACAATVLALACTPLTGAVATATPDAPAVTGTPARLVDLAVYSPAMQRSIAVKVLRPADTTRPAPTLYLLNGAGGGEDAANWFGQTDAVEFFADKHVNVVIPMEGAFSYYTDWERADEGLAETLGNNGRNMWTTFLTEELPPVIDATFGATGANALAGISMAGSSVLDLTIQAPTRYRSVAAYSGCAMTSDPLGRMFVTVVISLGGGDPENMWGPTGGDGWREHDPYLQAHRLPPIPMYISSGSGLPGPHDTLANPRLHNDDRQLLNQTLVGGAIESVTNLCTTRLAQRTAELGRTDITYNIRRPGTHSWGYWQDDLRDSWPMIARSIGAE GT:EXON 1|1-339:0| BL:SWS:NREP 1 BL:SWS:REP 45->337|CSP1_CORML|6e-40|35.3|272/657| SEG 8->42|alacaatvlalactpltgavatatpdapavtgtpa| BL:PDB:NREP 1 BL:PDB:REP 47->338|1f0nA|5e-24|29.7|269/284| RP:PDB:NREP 1 RP:PDB:REP 47->261|3e4dD|1e-26|18.6|188/265| RP:PFM:NREP 1 RP:PFM:REP 73->255|PF00756|1e-15|40.6|160/221|Esterase| HM:PFM:NREP 1 HM:PFM:REP 51->327|PF00756|6.2e-37|33.3|225/252|Esterase| RP:SCP:NREP 1 RP:SCP:REP 43->251|1pv1A|1e-25|21.3|183/290|c.69.1.34| HM:SCP:REP 42->339|1pv1A_|7.3e-25|28.1|249/0|c.69.1.34|1/1|alpha/beta-Hydrolases| OP:NHOMO 201 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- -----74566633344444-4644564444448676EECC-2------1------1--------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 293 STR:RPRED 86.4 SQ:SECSTR #############################################EEEEEETTTTEEEEEEEEcGGGGTccEEEEEEEccTTcccHHHHHHHHccccHHHHHHTcEEEEcccTTccTTcccccTcTTcccccTTGGGTccHHHHHTHHHHHHHHHccEEEEEEEEEcTHHHHHHHHHHcHcTTTccccEEEcccccGGGTTTHHHHHHHHHTTHcccTHHHcccGGTTTGGGcHHHHHTTccccEEEEEEETTcTTHHHHTcTEcccccccTTccccHHHHHHHHHHHHHHHHHHHHHHHTTcccEEEEccccccccHHHHHHHHHHTHHHHHHHHHc# DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHHHHccccccccccccccEEEcccccEEEEEEEEcHHHccEEEEEEEEcccccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHcccHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHcccccHHHHHHHcHHHHHHHccccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccc //