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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57231.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  224/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   5->241 2d0jD PDBj 3e-20 11.0 %
:RPS:SCOP  4->253 1xhbA2  c.68.1.17 * 2e-23 14.9 %
:HMM:SCOP  1->254 1xhbA2 c.68.1.17 * 2.2e-52 30.6 %
:RPS:PFM   8->123 PF00535 * Glycos_transf_2 2e-05 28.1 %
:HMM:PFM   8->186 PF00535 * Glycos_transf_2 5.2e-23 22.8 162/169  
:HMM:PFM   162->214 PF11397 * GlcNAc 0.00058 21.2 52/342  
:BLT:SWISS 6->93 Y270_SYNE7 4e-06 32.1 %
:BLT:SWISS 73->231 RFBC_MYXXA 3e-13 32.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57231.1 GT:GENE BAD57231.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2547618..2548484 GB:FROM 2547618 GB:TO 2548484 GB:DIRECTION + GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57231.1 LENGTH 288 SQ:AASEQ MRDKTVGVLLVTYQSAEDLPRFLDSLGPAVEPLAVDVVCVDNTSTDNGPDLVADYGGRVIRNTRNVGLSRAINQAAAQTDAEWLLVANPDTQLAPGAIAGLVETARADDRIGMIGPKILRLDGTPYPSGRRFPSLLVGVAHALLGGVWPGNPATRRYFGPQLTGPGDVDWISGCCMLFRRAAFDQVGGFDERYFLYFEEVQMALNMHRAGWRVVLDPTVEIRHREGGSMRSAPFRKVRAHHRSALRFYCDYHRGTPWILAAPLVAAGLAVRAVLAAAVTAATGRLARN GT:EXON 1|1-288:0| BL:SWS:NREP 2 BL:SWS:REP 6->93|Y270_SYNE7|4e-06|32.1|84/403| BL:SWS:REP 73->231|RFBC_MYXXA|3e-13|32.7|147/1275| TM:NTM 1 TM:REGION 259->281| SEG 135->147|llvgvahallggv| SEG 259->286|laaplvaaglavravlaaavtaatgrla| RP:PDB:NREP 1 RP:PDB:REP 5->241|2d0jD|3e-20|11.0|218/241| RP:PFM:NREP 1 RP:PFM:REP 8->123|PF00535|2e-05|28.1|114/148|Glycos_transf_2| HM:PFM:NREP 2 HM:PFM:REP 8->186|PF00535|5.2e-23|22.8|162/169|Glycos_transf_2| HM:PFM:REP 162->214|PF11397|0.00058|21.2|52/342|GlcNAc| RP:SCP:NREP 1 RP:SCP:REP 4->253|1xhbA2|2e-23|14.9|249/316|c.68.1.17| HM:SCP:REP 1->254|1xhbA2|2.2e-52|30.6|252/0|c.68.1.17|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 354 OP:NHOMOORG 236 OP:PATTERN --------1111-1------------------12----------1-11----1------1-------- 1-51211111111111111-111112111111111121121224-----1-1111---11----221-------------1-1-----1-1--222---1-11-11111----------------22233213321577B9---331-2-112-------------2-1-3------------1---------------------------------------------------------------------1---------------------------------------------------------------------1--11-----------------------------1---------1---------111------1--12-----------------1-44144144-11-111-----1-1-1--1-111----111--------133-2-3--------------------------------11--------1112-211111111111111122-2-11---11-1-1--1-2-1--1--1-1-------111--1-121--2--1-111---12112-11--11-------------------------------2-11----------------------------1-----------------------------------------------------------------------------------------------------12212-1-----------------------1----1----12---1111----------------------------11-1-11---1111--------11----------------------------------------------31- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 87.5 SQ:SECSTR cccccEEEEEEEcccTTHHHHHHHHHHHHTTcTTEEEEEEEccccccHHHHHHcccccccHHHHHHHHHHHHHHcccccccccEEEEccTTcEEcTHHHHHHHTcccEEEccEEEETTEEEEEEEEccccEEEEHHHEEcTTcc#EEccccTTccccccGGGEEEEHHHHHHcTTcccccccccTTcHHHHGHHHHHccGGGcEEcHHHHTcTcEEEEccEEcccccccccTTccccccccHHHTTccccccc################################### DISOP:02AL 1-2, 287-288| PSIPRED cccccEEEEEEEcccHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHcccEEEEccccccHHHHHHHHHHHccccEEEEEccccEEcHHHHHHHHHHHHHcccEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHcccEEEEEccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //