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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57232.1
DDBJ      :             putative nitroreductase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  263/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.90.1
:278 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->240 1zchA PDBj 8e-35 44.2 %
:RPS:PDB   31->278 1bkjA PDBj 3e-37 32.5 %
:RPS:SCOP  31->278 1bkjA  d.90.1.1 * 7e-41 32.2 %
:HMM:SCOP  31->278 1bkjA_ d.90.1.1 * 2.2e-72 37.7 %
:RPS:PFM   37->107 PF00881 * Nitroreductase 2e-12 50.7 %
:HMM:PFM   38->193 PF00881 * Nitroreductase 3.1e-31 34.0 144/165  
:HMM:PFM   220->259 PF07574 * SMC_Nse1 0.00066 25.0 40/200  
:BLT:SWISS 31->240 YCND_BACSU 3e-34 44.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57232.1 GT:GENE BAD57232.1 GT:PRODUCT putative nitroreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2548546..2549382 GB:FROM 2548546 GB:TO 2549382 GB:DIRECTION + GB:PRODUCT putative nitroreductase GB:PROTEIN_ID BAD57232.1 LENGTH 278 SQ:AASEQ MAAMTQIAPSPAETVRTRYRDAQVPEPAVWNATLAVLHEHRSVRRYLPDPVSDDTLRLLISAAQSAPTSSNLQVWSVVAVRDPDRKARLAALAGDQAHVVRAPLLLVWTADFARLRQLAADHDAPLAGADYLESSYVGFIDAALAAQNAVVAAESLGLGTVYIGALRNHPEAVATELQLPPGVFATFGLVVGHPDPAERAQVKPRLPQQAVLHRETYRLPEQRSHVATYERRIAEFYGEQDLAHSWTERVLARLASARSLAGRDRLRTALHNQGFPLR GT:EXON 1|1-278:0| BL:SWS:NREP 1 BL:SWS:REP 31->240|YCND_BACSU|3e-34|44.2|208/249| SEG 142->153|aalaaqnavvaa| SEG 249->267|rvlarlasarslagrdrlr| BL:PDB:NREP 1 BL:PDB:REP 31->240|1zchA|8e-35|44.2|208/249| RP:PDB:NREP 1 RP:PDB:REP 31->278|1bkjA|3e-37|32.5|228/230| RP:PFM:NREP 1 RP:PFM:REP 37->107|PF00881|2e-12|50.7|71/157|Nitroreductase| HM:PFM:NREP 2 HM:PFM:REP 38->193|PF00881|3.1e-31|34.0|144/165|Nitroreductase| HM:PFM:REP 220->259|PF07574|0.00066|25.0|40/200|SMC_Nse1| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00881|IPR000415| RP:SCP:NREP 1 RP:SCP:REP 31->278|1bkjA|7e-41|32.2|230/230|d.90.1.1| HM:SCP:REP 31->278|1bkjA_|2.2e-72|37.7|239/239|d.90.1.1|1/1|FMN-dependent nitroreductase-like| OP:NHOMO 311 OP:NHOMOORG 278 OP:PATTERN 22---1-------------1---1-------1------------11-11---1-----------1--1 ------111111-------------1----------1-11-1--------------------------1--1111111----------1111-1------------------------------------------111----------------------------312-------------11122-----2111111111111111122212111-1111113333221111111111111111111111111-21-1-1111111111111-222-------1--111111-1111-------------1--111-------2211111---1------------1----------1-----------1------------1--11----------------------1--1------1--1--------11----1-------------------1----------------------------------------11-----------------------------------------------------1------------1--1-------2-11-----1--1-------1-----------------------------111-1-----1-------1------11----------------11211121111111111-1111111111111111111111221--11-111-11111111--1111111---------------------------1--11111111------------------11----------1------1----------11111111111111-----------------------------------------------------1------------1------ -------------------1----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 85.6 SQ:SECSTR ############################cHcHHHHHHHTcccccccccccccHHHHHHHHHHHHTcccGGGcccEEEEEcccHHHHHHHHHHTTccTHHHHccEEEEEEEEcHHHHHHcTTcHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEEGGGGGGHHHHHHHTTccTTEEEEEEEEEEcEcccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHTc############cccTTHHHHHHHTTcccc DISOP:02AL 3-7, 242-244, 277-278| PSIPRED cccccccccccccHHHHHcccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHccHHHHcccEEEEEHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHccHHHHHHHHccccccEEEEEEEcccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHcccccc //