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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57234.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  726/915 : Eukaryota  103/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:471 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->190 2gfpA PDBj 2e-10 27.3 %
:RPS:PDB   80->197 2d33D PDBj 2e-06 5.9 %
:RPS:SCOP  19->205 1pw4A  f.38.1.1 * 3e-15 13.9 %
:HMM:SCOP  1->462 1pw4A_ f.38.1.1 * 1.4e-63 31.4 %
:RPS:PFM   23->176 PF07690 * MFS_1 8e-19 38.3 %
:HMM:PFM   23->414 PF07690 * MFS_1 5.6e-52 32.3 344/353  
:BLT:SWISS 19->421 BMR3_BACSU 6e-52 33.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57234.1 GT:GENE BAD57234.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2550458..2551873) GB:FROM 2550458 GB:TO 2551873 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57234.1 LENGTH 471 SQ:AASEQ MATETTSAGIGLRSDRGPILAALMLSTGLVALDSTIIATAVLSITRSLGGFAQFPWLFSIYLLAQAVTVPIYGKLADTLGRKPVILFGIGMFAVGSLLCGLATSMPALIVFRALQGVGAGAIQPMTMVIAGDLYTLTERAKVQGYLASVWAMSSVAGPLLGGVFADFVSWRWIFLINLPLAAVAAWTLVRSFHEHPHRRDQRIDYLGAALLTVGAGAVILGLLEGGQAWAWSSPVSIGVFGGGALALVLFVLVERRAGNAILPLWVFTRRVVVASSLMSVLIGALLLGLTSYVPTFTQGVLGTGALVAGLTVGALTLGWPLAASQAGRVYLRIGFRGSALIGSGLAVLGAASTLLIDQDSTLWQVSLSCFVIGAGMGLVATPSLIAAQTSAEWSERGVVTSANMFARSLGSAVGVAVFGAIVNARVAGAEHPAPAVLADAVHLVFVAVVVSAVVLLAASAMLPGRAVDGTG GT:EXON 1|1-471:0| BL:SWS:NREP 1 BL:SWS:REP 19->421|BMR3_BACSU|6e-52|33.9|401/512| TM:NTM 14 TM:REGION 21->43| TM:REGION 51->73| TM:REGION 86->108| TM:REGION 111->133| TM:REGION 143->165| TM:REGION 171->193| TM:REGION 205->227| TM:REGION 234->254| TM:REGION 271->293| TM:REGION 300->322| TM:REGION 337->359| TM:REGION 366->388| TM:REGION 408->430| TM:REGION 440->462| SEG 206->226|lgaalltvgagavilgllegg| SEG 238->253|gvfgggalalvlfvlv| SEG 299->318|gvlgtgalvagltvgaltlg| SEG 435->460|avladavhlvfvavvvsavvllaasa| BL:PDB:NREP 1 BL:PDB:REP 35->190|2gfpA|2e-10|27.3|154/375| RP:PDB:NREP 1 RP:PDB:REP 80->197|2d33D|2e-06|5.9|118/499| RP:PFM:NREP 1 RP:PFM:REP 23->176|PF07690|8e-19|38.3|154/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 23->414|PF07690|5.6e-52|32.3|344/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 19->205|1pw4A|3e-15|13.9|187/434|f.38.1.1| HM:SCP:REP 1->462|1pw4A_|1.4e-63|31.4|398/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 6502 OP:NHOMOORG 873 OP:PATTERN ----1-8545544463-4111--1-11---1-2121--1111-9A42431452----11-16661--- 5266j345888464978AA-A822JAAAAAABAA9BCNKK5H9J9A955972DBC527--AC73B8ENRS12111322-2314141122211-2-----1-51-1F-424--------------1111112111119885521153--12-----11-1----1--1--31-1-----1----4451-1-2B3DCCDCDDDG8EGDDFF75CB6DEDD3467573656666EN476666666666666955B866A3EG45534HF77EB649757766111----134-----------11111111111111-----1---1--8C111212121135CC1332-----4--2-9A6441-23421111--11193373113335B9B625885553466456566B-5555584B5F1-L775GH6IIH797611223-22223227777777755524215--1-1111--2211-11211111111-1---66445867BPTURSQJFFFFNMUSIIGI9JYLW9DAD--A9H237459485C14A1113374122222212132312523333-332241311211321442481121-11-11-1-1-1-------1111-55767232-12-224444232555223112521-1---1------ADA73E4A998AA9A89-999A98B9989BAAAAAA9FMHBD8CAA87989999997A798G986879641A66666666666--116546433332-658-11-22-2211---2AAAAB681122165669EDE498B6179835555755524455444545633433655553331-----1-11--11------------------------------------11---11111131 ----211-2----16LSeIfdgcv*zgOOHMJLidUHOJMENNEFFcSMlge*iMQWSPKKN65636C7643B4E48468677768A6-IHCS8EDDA9FB3AF9A--6-------------------------------------------------1----1-----------------------31W----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 163 STR:RPRED 34.6 SQ:SECSTR ##################################HHHHHHHHHHHTTccHHHHHccHHHHHHHHHHHHHTTHHHHHTTccTTccccccHHHHHHHHHHHHHcccHHHHTTccEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcccEEEEEEEEccTTcTTcccHHHHHHHHHHHHHHHHccccc################################################################################################################################################################################################################################################################################## DISOP:02AL 1-16, 463-464, 466-471| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //