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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57238.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  42/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:320 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  146->276 1pswA  c.87.1.7 * 3e-19 22.9 %
:HMM:SCOP  4->310 1pswA_ c.87.1.7 * 1.6e-54 36.8 %
:RPS:PFM   152->252 PF01075 * Glyco_transf_9 2e-11 43.0 %
:HMM:PFM   150->270 PF01075 * Glyco_transf_9 3.2e-28 38.0 121/247  
:BLT:SWISS 162->284 RFAF_SALTY 5e-05 25.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57238.1 GT:GENE BAD57238.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2554736..2555698) GB:FROM 2554736 GB:TO 2555698 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57238.1 LENGTH 320 SQ:AASEQ MGVTLALRALGLGDLLTALPALRALRAARPDDRLVLAAPGWLRPIVDLACCVDELHETPGLGRLHWTGPPPDLAVNLHGRGPQSIADLLATGAARLITHAHPDFPIPGPSWSPTAHEVRRWCDLLAGAGIPADPAHLDLAPPPEGTPHAGAVVVHPGGSSAARRWPADRFAEVAAYLRGHADRVLVTGDAAERPLAESVAARAGLGPDAVLAGELDLRELAATVAGAALVVCSDTGVGHLATAFGTPSVVLFGPNPPAWWGPPPQRRRHVALWAGHIGDPHGDTVDPGLLALGTDEVIAAVRAQLTRWPPRARQDSPAPS GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 162->284|RFAF_SALTY|5e-05|25.2|123/348| SEG 4->38|tlalralglgdlltalpalralraarpddrlvlaa| SEG 131->143|padpahldlappp| SEG 217->231|lrelaatvagaalvv| SEG 253->264|gpnppawwgppp| RP:PFM:NREP 1 RP:PFM:REP 152->252|PF01075|2e-11|43.0|100/237|Glyco_transf_9| HM:PFM:NREP 1 HM:PFM:REP 150->270|PF01075|3.2e-28|38.0|121/247|Glyco_transf_9| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01075|IPR002201| GO:PFM GO:0016740|"GO:transferase activity"|PF01075|IPR002201| RP:SCP:NREP 1 RP:SCP:REP 146->276|1pswA|3e-19|22.9|131/331|c.87.1.7| HM:SCP:REP 4->310|1pswA_|1.6e-54|36.8|304/0|c.87.1.7|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 69 OP:NHOMOORG 42 OP:PATTERN -------------------------------------------------------------------- ---------------1--------------------3----1-------11-133-----22---11-1-1-----------1--------------------------------------------------------------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1222121-222233-122221--2-22---------------------1--------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 309-320| PSIPRED ccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccEEEEEccccHHHHHcccccEEEEccccHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHcccEEEEcccHHHHHHHHHcccEEEEEcccccccccccccccEEEEEEcccccccccccHHHHHHcccHHHHHHHHHHHHccccccccccccccc //