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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57242.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:372 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  40->337 1pswA  c.87.1.7 * 8e-20 20.7 %
:HMM:SCOP  9->342 1pswA_ c.87.1.7 * 8.9e-60 35.9 %
:RPS:PFM   182->284 PF01075 * Glyco_transf_9 2e-10 39.8 %
:HMM:PFM   181->308 PF01075 * Glyco_transf_9 1.5e-20 34.1 126/247  
:BLT:SWISS 172->279 RFAQ_ECOLX 3e-06 26.9 %
:BLT:SWISS 256->291 Y261_HAEIN 2e-04 48.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57242.1 GT:GENE BAD57242.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2557868..2558986) GB:FROM 2557868 GB:TO 2558986 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57242.1 LENGTH 372 SQ:AASEQ MTSPPPPAPHVLAARLDSAGDVLLMGPAVRAVAAGAGRVTFLAGPRGVAAARLLPGIDEIVEYHAGWVDFDSPPVTAAGIDAFVTDLRARRIDEAVIFTSFHQSPLPLALLLRMAGVPRISAISPDYPGSLLDVRHRVDDDVPEPERALSLAEAAGYRGDGGGLRVRADLPDVGHLTGAPGYVVVHPGAAVPARRPSAERCRSYVAALTAAGHRVLVTGGPDERELTAAVAAGLAPDLGGATDLAGLAAILRDAAVVVAPNTGPAHLAAAVGTPIVSLFAPVVPATRWAPYGVPTVLLGDQRAACAGSRARECPVPGHPCLDGITAQEVVAAVATLLDGRDAPTRLRPRRFDRARRGISEADVVGAADQGQA GT:EXON 1|1-372:0| BL:SWS:NREP 2 BL:SWS:REP 172->279|RFAQ_ECOLX|3e-06|26.9|108/340| BL:SWS:REP 256->291|Y261_HAEIN|2e-04|48.6|35/347| SEG 28->39|avravaagagrv| SEG 133->142|dvrhrvdddv| SEG 226->249|ltaavaaglapdlggatdlaglaa| SEG 345->356|rlrprrfdrarr| RP:PFM:NREP 1 RP:PFM:REP 182->284|PF01075|2e-10|39.8|103/237|Glyco_transf_9| HM:PFM:NREP 1 HM:PFM:REP 181->308|PF01075|1.5e-20|34.1|126/247|Glyco_transf_9| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01075|IPR002201| GO:PFM GO:0016740|"GO:transferase activity"|PF01075|IPR002201| RP:SCP:NREP 1 RP:SCP:REP 40->337|1pswA|8e-20|20.7|270/331|c.87.1.7| HM:SCP:REP 9->342|1pswA_|8.9e-60|35.9|323/0|c.87.1.7|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 59 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- ---------------11-------------------1----2-------11-121-----11---11-1-1-----------1------------------------1-------------------------------------1---2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------1111111222211-122221--1-1--------1-------------1--------------11-1---------------1-----1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 369-372| PSIPRED cccccccccEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccccccccccHHHHHHHHHcccEEEEcccHHHHHHHHHcccEEEEEcccccccccccccccEEEEEccccccccccccccccccHHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHEEEccccccc //