[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57243.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   128->324 2bgtA PDBj 2e-13 7.7 %
:RPS:SCOP  188->326 1c3jA  c.87.1.1 * 3e-12 13.2 %
:HMM:SCOP  207->324 2iw1A1 c.87.1.8 * 1.4e-15 34.8 %
:RPS:PFM   230->300 PF00534 * Glycos_transf_1 2e-05 39.4 %
:HMM:PFM   209->304 PF00534 * Glycos_transf_1 7.6e-11 26.0 96/172  
:BLT:SWISS 225->322 ALG2_RHIPU 2e-08 28.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57243.1 GT:GENE BAD57243.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2558983..2559990) GB:FROM 2558983 GB:TO 2559990 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57243.1 LENGTH 335 SQ:AASEQ MAVTGRRLTILAWHVHGSWMTSFVQGGHRYLIPADGHQGEWARGRCGRPWPESAQEIAPAALADAEIDVVVVQRPRELDLTLEWTGRRPGIDVPALYVEHNTPNQHAALTRHPLADRPEIPIVHVTDFNRLMWDNGRNPATVVPHGVLDPGYRYTGELARAATIINEPVRRGRVTGTDLLVPLSAAAPIDVFGMGTDDLHEALEVGDDRVHGAGDHTQDRLHAELGRRRVFLHLPRWTSLGLSLLEAMYLGMPVVAVGSTEACASIPPEAGTVSTDPAVLADAVRGYLAEPMLAEVAGKAGRQWAHAHFGIDAFVERWDALLARTIAEHPAGRPS GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 225->322|ALG2_RHIPU|2e-08|28.6|98/455| RP:PDB:NREP 1 RP:PDB:REP 128->324|2bgtA|2e-13|7.7|196/329| RP:PFM:NREP 1 RP:PFM:REP 230->300|PF00534|2e-05|39.4|71/165|Glycos_transf_1| HM:PFM:NREP 1 HM:PFM:REP 209->304|PF00534|7.6e-11|26.0|96/172|Glycos_transf_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 188->326|1c3jA|3e-12|13.2|136/333|c.87.1.1| HM:SCP:REP 207->324|2iw1A1|1.4e-15|34.8|115/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 44 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- ---------------11-------------------1----1-------11-111-----11---11-1-------------1----------------------1-1-----------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-111-11111-11111---1-11----11---------------1--------------111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 98.8 SQ:SECSTR ####TcEEEHHHcccEEEHHHHHHHTccEEEEccHHHHHHHHHTTTHHHHHHcGGGEEEccccccTccccccTcHHHHHHHHHHHccGGGTcGGGGGGGGGGTTcHHHHHHHHHHHHHHHHHHHHHHTTTccccEEEEEccGGGGGTHTcTTccccccccccEEEEEEcccccTHHHHHHHHHHccccccEEEEccccGGGcccTcccccEEEccccTTcHHHHHTTEEEEEEcccTTTTcHHHHHHHHcccEEEEEGGGcTTccccccGGGEEccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTHHHccTGGccc DISOP:02AL 1-4, 328-335| PSIPRED ccccccHHEEEHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHccccccccEEEEEcccccHHHHHHHccccccccEEEEEEcHHHHHHHHcccccccEEcccccccccccccccccHHHEEHHHHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHcccccEEEEEcccHHHHHHHHHcccEEEEcccccccccHHHHHHHccccEEEEcccccHHEEccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccc //