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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57245.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  571/915 : Eukaryota  155/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:405 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->388 3c4qB PDBj 3e-37 31.9 %
:RPS:PDB   1->391 3c48A PDBj 5e-58 30.1 %
:RPS:SCOP  1->391 2bisA1  c.87.1.8 * 5e-50 26.0 %
:HMM:SCOP  1->391 1rzuA_ c.87.1.8 * 8.1e-95 41.3 %
:RPS:PFM   84->199 PF05693 * Glycogen_syn 3e-05 36.4 %
:RPS:PFM   195->366 PF00534 * Glycos_transf_1 2e-26 47.4 %
:HMM:PFM   212->370 PF00534 * Glycos_transf_1 2e-42 43.7 151/172  
:HMM:PFM   3->49 PF08323 * Glyco_transf_5 0.0002 35.7 42/241  
:HMM:PFM   90->140 PF08323 * Glyco_transf_5 1.4e-06 29.2 48/241  
:BLT:SWISS 2->390 Y496_MYCBO 2e-41 33.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57245.1 GT:GENE BAD57245.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2560714..2561931) GB:FROM 2560714 GB:TO 2561931 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57245.1 LENGTH 405 SQ:AASEQ MRIAMVSEHASPLAPLGGTDAGGQNVHVAELSAALARRGHEVTVYTRHDGSCAEPEVLTGAGYRVVHVPAGPPHPIPKDDILPFLSQFARFLRERWATERPEVVHAHFWMSGVAAELAARKFDVPVVLTFHALGTVKRRYQGADDTSPPTRLRLERQIANRATHVIATCSDEVAELGEMGVPRNRTTVVPCGVDLEQFTPDGPTDPKTYPHRLVTVGRMVRRKGFDTAIGALADLPDTELVIAGGAPGSDAEADPEMSRLRELAADYGVADRVRLAGQVPRAAMPALLRSADVVVCTPWYEPFGIVPLEAMACAKPVVASAVGGMLDTVHDGVTGRLVMPVTSRAVAQAVRPLLADPDLRLAFGTAGYRRAHSTYSWDRVAERTLTTYQRITSATNAGATTASAG GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 2->390|Y496_MYCBO|2e-41|33.2|380/480| SEG 392->404|tsatnagattasa| BL:PDB:NREP 1 BL:PDB:REP 1->388|3c4qB|3e-37|31.9|367/393| RP:PDB:NREP 1 RP:PDB:REP 1->391|3c48A|5e-58|30.1|372/399| RP:PFM:NREP 2 RP:PFM:REP 84->199|PF05693|3e-05|36.4|107/582|Glycogen_syn| RP:PFM:REP 195->366|PF00534|2e-26|47.4|156/165|Glycos_transf_1| HM:PFM:NREP 3 HM:PFM:REP 212->370|PF00534|2e-42|43.7|151/172|Glycos_transf_1| HM:PFM:REP 3->49|PF08323|0.0002|35.7|42/241|Glyco_transf_5| HM:PFM:REP 90->140|PF08323|1.4e-06|29.2|48/241|Glyco_transf_5| GO:PFM:NREP 3 GO:PFM GO:0004373|"GO:glycogen (starch) synthase activity"|PF05693|IPR008631| GO:PFM GO:0005978|"GO:glycogen biosynthetic process"|PF05693|IPR008631| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 1->391|2bisA1|5e-50|26.0|373/437|c.87.1.8| HM:SCP:REP 1->391|1rzuA_|8.1e-95|41.3|375/477|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 2542 OP:NHOMOORG 779 OP:PATTERN 22---111-------1541213128333584211322322222451E7549AA-25243621--1-1- 3274C64655634288855-5A44755555549BBB889A59A893543551422441224754A65A6781222111--1-41-1--21521212---11221122273---------------2234214346-PMMVQ233O7G79O7862288343232656DEHI7-3221112-1212521226-311-----11-2-1-1111344-3--23451-12------7A--------------------1-----------1----1--1-------------------------------------------------31-33444333324211333--1-13-18-13422446143443243---6264223111--2444411222-1422442343444-32425536333-4442247232885232124433554345555555567645245----------11-----------------142331365573443437222233863333-235C6433--11-4331313322-324641322--1---1338867-266259538233411414727-442A39675-2------------------1---284---143312---------2------21------7336-------22213-133111111--3112122112312111112-1---2221-1-1--3--------212-222-1--111111111-1---122222----3135----2-1----------------1-1221112122--222212221111111111--111111122-11--11111111------7-221111--------1---------------------------141-1112-137- 1122222-212---1131--1113-32--1111-1-----------21212212121-1---111111--11--111-111--1---2-1213-1-11111-1121121123422222221-32212323B2-324212-221321222222-2-222223224222222511314122N1221161322432321223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 96.5 SQ:SECSTR cEEEEEcTTccTTccTTcTTcccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEEEcccccccccGGGGGGGHHHHHHHHHHHHHHHTcccEEEEHHHHHHHHHHHHHHHTccEEEEccccHHHHcccccHHHTTHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHcccGGGEEEccccccTTTcccccHHHHHHTcEEEEEEccccGGGcHHHHHHHHHHHTTccEEEEEEEEEccHHHcccccHHHHHHHHTTcTTTEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHTTccEEEEccTTHHHHcccTTTEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH############## DISOP:02AL 391-405| PSIPRED cEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHccccccEEEEcccccHHHccccccccccccccEEEEEEEccHHccHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHccccEEEEcccccHHHHccccEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccccc //