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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57246.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:363 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  40->306 1pswA  c.87.1.7 * 2e-28 22.2 %
:HMM:SCOP  24->360 1pswA_ c.87.1.7 * 5.3e-55 34.8 %
:RPS:PFM   167->327 PF01075 * Glyco_transf_9 4e-13 32.9 %
:HMM:PFM   138->306 PF01075 * Glyco_transf_9 4.3e-24 31.5 165/247  
:HMM:PFM   321->331 PF04423 * Rad50_zn_hook 0.001 54.5 11/54  
:BLT:SWISS 189->295 RFAF_HAEIN 5e-06 28.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57246.1 GT:GENE BAD57246.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2562182..2563273 GB:FROM 2562182 GB:TO 2563273 GB:DIRECTION + GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57246.1 LENGTH 363 SQ:AASEQ MTTREQVSRRSVLGPLAEPFPDVRSIVVLRGGGLGDLLFAMPAVHALAATYPDAQITLLGSPVHAELLGERPGPVAEVIPLPAAEHEGAFSRDFARRRPDLGVQLHGGGAWSNPFLTGLGPRWTVGPRAADAGPLTRTLPFRYYQHEMLRWLEVAGLAGAAPVVLEPELEVTGADLLASEAVLHETAGPVVALHPGATDPRRRWPPDRFADVAAHCVARGAVVLVLGAESERPLVEEVCLLARRRTPQPEAVRSMIGASMSALCGVLARSTLFLGNDSGPRHLARAVGTPTVGIYWIGNVVNAGPLVRTRDRVLASWMTNCPVCHADLTDETLPRCPHDDSVVTTVRTEQVCAEVDDLLTVQG GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 189->295|RFAF_HAEIN|5e-06|28.7|101/346| SEG 29->38|lrggglgdll| SEG 152->166|levaglagaapvvle| SEG 217->228|vargavvlvlga| RP:PFM:NREP 1 RP:PFM:REP 167->327|PF01075|4e-13|32.9|155/237|Glyco_transf_9| HM:PFM:NREP 2 HM:PFM:REP 138->306|PF01075|4.3e-24|31.5|165/247|Glyco_transf_9| HM:PFM:REP 321->331|PF04423|0.001|54.5|11/54|Rad50_zn_hook| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01075|IPR002201| GO:PFM GO:0016740|"GO:transferase activity"|PF01075|IPR002201| RP:SCP:NREP 1 RP:SCP:REP 40->306|1pswA|2e-28|22.2|261/331|c.87.1.7| HM:SCP:REP 24->360|1pswA_|5.3e-55|34.8|325/0|c.87.1.7|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 81 OP:NHOMOORG 55 OP:PATTERN -------------------------------------------------------------------- --2------------1--------------------1------------11-111-----22--------1----------------------------------1---------------------------------------2---1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111---1-------------------------------------------1222-21-222244-12222---1-11---------------------2--------------132------1-----11-------11--11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-13| PSIPRED ccccccccHHHHHcccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHcccEEEEcccHHHHHHHHHcccEEEEEccccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHccHHHHHHHHHHHHHccc //