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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57248.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  148/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:429 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  46->312 1pv6A  f.38.1.2 * 7e-05 13.6 %
:HMM:SCOP  1->426 1pw4A_ f.38.1.1 * 2.6e-62 28.3 %
:RPS:PFM   48->177 PF07690 * MFS_1 7e-08 33.9 %
:HMM:PFM   28->369 PF07690 * MFS_1 1.7e-35 27.6 326/353  
:HMM:PFM   370->415 PF07690 * MFS_1 0.0004 36.4 44/353  
:BLT:SWISS 47->400 YBFB_BACSU 7e-31 29.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57248.1 GT:GENE BAD57248.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2564187..2565476 GB:FROM 2564187 GB:TO 2565476 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57248.1 LENGTH 429 SQ:AASEQ MSLRTSAPVGAPRRPRVHPAWWVAAVAFLALLGAAGFRGAPGALMVPLHHEFGWSMSVMSLAVSINLVLYGLVAPFAAALMDRFGIRQVVSAALLLVALGAGGSVFMTASWQLLVCWGLLIGTGTGAMALVFAATIANRWFVRRRGLVMGVLTAGAATGQLVILPPVAALADRVGWRPASLVIGGAALVVAPLVWWVLRDHPEDRGVAPYGADPGTYVAAPRTGGGAVRRAIDGLVFAARHRAFWALALAFAICGATTNGLVGIHFIPSAHDHGMPATTAAGLLAAVGVFDIAGTIASGWLTDKFDPRALLVGYYGFRGLSLLVLPLLLAQHVHPSMILFVVLYGLDWVATVPPTAALCRDIFGDRGTIVFGWVFASHQLGAAAAAFGAGVIRDRFGSYTYAWLAGAALCVLAAGVSVLARPPRSRPVV GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 47->400|YBFB_BACSU|7e-31|29.3|345/416| TM:NTM 4 TM:REGION 16->38| TM:REGION 52->74| TM:REGION 103->125| TM:REGION 161->183| SEG 19->44|pawwvaavaflallgaagfrgapgal| SEG 89->105|vvsaalllvalgaggsv| SEG 179->198|aslviggaalvvaplvwwvl| SEG 277->289|attaagllaavgv| SEG 320->329|lsllvlplll| SEG 381->390|gaaaaafgag| SEG 402->420|awlagaalcvlaagvsvla| RP:PFM:NREP 1 RP:PFM:REP 48->177|PF07690|7e-08|33.9|127/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 28->369|PF07690|1.7e-35|27.6|326/353|MFS_1| HM:PFM:REP 370->415|PF07690|0.0004|36.4|44/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 46->312|1pv6A|7e-05|13.6|250/417|f.38.1.2| HM:SCP:REP 1->426|1pw4A_|2.6e-62|28.3|407/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 208 OP:NHOMOORG 153 OP:PATTERN -------------------------------------------------------------------- 1------------------------1----------1111------------111---------2-2212----------1--------------------------------------------------------11-----1------------------------1-------------11--------1---------------1111-1------1---------11--------------------------------------------------------------------------------------------------------------------------------------------1-----------1-4331112-11111111111111---1--11111--12221111111-21--------------------------211-----------------------------1--2---21233332232222222222222123112112--1111112121212-11-----1------------1-------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------111111------11111----11111111------------------------------------------------------------------------------------------------- ------------------------1---------------------------1-11---------------------------------------------------------1------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-15, 428-429| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccc //