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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57249.1
DDBJ      :             putative lipase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  50/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:462 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->461 2veoA PDBj 5e-32 30.5 %
:RPS:SCOP  167->256 1ve6A2  c.69.1.33 * 2e-05 28.9 %
:HMM:SCOP  143->390 1n1mA2 c.69.1.24 * 9.8e-11 23.1 %
:RPS:PFM   167->419 PF03583 * LIP 4e-28 37.8 %
:HMM:PFM   152->422 PF03583 * LIP 2.7e-60 34.7 265/291  
:BLT:SWISS 24->449 LIP2_CANAL 4e-40 31.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57249.1 GT:GENE BAD57249.1 GT:PRODUCT putative lipase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2565584..2566972 GB:FROM 2565584 GB:TO 2566972 GB:DIRECTION + GB:PRODUCT putative lipase GB:PROTEIN_ID BAD57249.1 LENGTH 462 SQ:AASEQ MPARLGRRRPAYLVRSTVLVAAAIALVCTVFPVSAGAAPNLADPFYAPPPGYEATAPGTILRTRAIDVGFFQAVAMQVDGWQVLYRTTRADGSPYSAVTTVLKPRHGGPPAALLSFQNMTDAVAPHCVPSQALQRGAVPWLDPGRPGPVTLTTMAAETPLVAAALARGWVVSVPDYGGVDNHFLAAREPGYVVLDGIRATAAFGPAGLPGPDTRALLWGYSGGGIATGWAAQEQPGYAPELTLAGAALGAPVGDFRAGIATANGKPVDGALLPVALMGMAEGSAEFAAALNRYLTPAGQEKVRAAAAHCTPQNLLANLGFDASAHLTVPLAEVFADPVISAAVDAAELGSAAPTAPLYVYNAVGDDISTIDGVGALVDAYCRAGTAVTFRQEQLPMPVSAHTVEWGLGAPGALAWLEQRAHDTAVPSGCDIRAVPATLLAPEALDALGSGIIAGSMRQLLGF GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 24->449|LIP2_CANAL|4e-40|31.1|405/466| TM:NTM 1 TM:REGION 13->35| SEG 155->166|aaetplvaaala| BL:PDB:NREP 1 BL:PDB:REP 37->461|2veoA|5e-32|30.5|400/430| RP:PFM:NREP 1 RP:PFM:REP 167->419|PF03583|4e-28|37.8|246/274|LIP| HM:PFM:NREP 1 HM:PFM:REP 152->422|PF03583|2.7e-60|34.7|265/291|LIP| GO:PFM:NREP 2 GO:PFM GO:0004806|"GO:triglyceride lipase activity"|PF03583|IPR005152| GO:PFM GO:0016042|"GO:lipid catabolic process"|PF03583|IPR005152| RP:SCP:NREP 1 RP:SCP:REP 167->256|1ve6A2|2e-05|28.9|83/260|c.69.1.33| HM:SCP:REP 143->390|1n1mA2|9.8e-11|23.1|182/256|c.69.1.24|1/1|alpha/beta-Hydrolases| OP:NHOMO 210 OP:NHOMOORG 97 OP:PATTERN -------------------------------------------------------------------- ----11111111-172211-11--21111112133378B7-21--------------1-------11-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--------------------------------------------------------------------1111----------------1----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------121-223161751111112221111111-1111113222--11------3----4--1-1------A9A44------2---------2------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 86.6 SQ:SECSTR ####################################ccccGGcGGGcccTTGGGccTTcEEEEEEEHHHHHTTcE####EEEEEEEEEcTTccEEEEEEEEEEccccccccEEEEEEcccccccGGGcHHHHHccc####ccc####TTGGGGTccHHHHHHHHHHTTcEEEEEcTTTTTTcTTcHHHHHHHHHHHHHHHHHH##TTccT#TcEEEEEEETHHHHHHHHHHHHHHHHcTTcEEEEEEEEcccccHHHHHHHHTTcTTTHHHH#HHHHHHHHHcHHHHHHHHTTccHHHHHHHHTcTTccHHHHHHHGGcccTTGGGcTTHHHHHHHccccTT##TccccccccccEEEEEEETTcccccHHHHHHHHHHHHHTTcEEEEE####EEccccHHHHHHHTHHHHH#HHHHHHHHTccccTcccccc#cTTTcccHHHHHcHH#HHHHHHTTcT# DISOP:02AL 1-7| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEEEEEEcccccEEEEEEEEEEEccccccccEEEEEEHHHHccccccccHHHHHccHHHccccccccccHHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHccHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHccHHHHHHHHHHHHcccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHcc //