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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57257.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   8->239 2d0jD PDBj 3e-14 11.4 %
:RPS:SCOP  8->154 1omxA  c.68.1.15 * 8e-17 14.7 %
:HMM:SCOP  3->260 1fo8A_ c.68.1.10 * 1.3e-25 30.3 %
:RPS:PFM   10->119 PF00535 * Glycos_transf_2 7e-07 34.0 %
:HMM:PFM   9->142 PF00535 * Glycos_transf_2 1.3e-14 24.2 128/169  
:BLT:SWISS 8->159 B3GNL_HUMAN 1e-08 29.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57257.1 GT:GENE BAD57257.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2573657..2574523) GB:FROM 2573657 GB:TO 2574523 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD57257.1 LENGTH 288 SQ:AASEQ MTPAVMEIDVLVPTRNRPTELATTLSGLAAQDFPDFGVIVSDQSDDAPSYDTPAARTMARVLRRHGHPVRFGSHCPPRGMAEHRAHLLAQSRARYVLFLDDDVWLEPDTVRRMHASITEWGCGLVGCAVQGLSYLSDFRPHELEPFERWRGRPEPEHIVRGEPAWERWRLHNAANPTHLGEAVATEPGARVPYKIAWVGGCVLYDRAALVETGGFDFWTELPPQHSGEDVLAQLRVLARYGGAGILPSGAVHLESPTTVRERPVEAYEIVPPDFWPERAVRGGRSARP GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 8->159|B3GNL_HUMAN|1e-08|29.2|144/361| RP:PDB:NREP 1 RP:PDB:REP 8->239|2d0jD|3e-14|11.4|201/241| RP:PFM:NREP 1 RP:PFM:REP 10->119|PF00535|7e-07|34.0|100/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 9->142|PF00535|1.3e-14|24.2|128/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 8->154|1omxA|8e-17|14.7|136/250|c.68.1.15| HM:SCP:REP 3->260|1fo8A_|1.3e-25|30.3|195/0|c.68.1.10|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 11 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----11-----------------11---------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 89.6 SQ:SECSTR ccccEccEEEEEEEcccTTHHHHHHHHHHHHTcTTEEEEEEEccccccHHHHHHHHHHcEEcccccccccccHHHHHHHHHHHHHHcccccccccEEEEccTTcEEcTHHHHHHHTcccEEEccEEEETcccTETTEEEEEEEEccccEEEEEccccTTccccccGGGEEEEHHHHHHHGGGTcccHHHHHHHHHHHHcTTcccccccccTTcHHHHHHHTcccHHHccGGGcEEcHHHcccEEEccEEEEEEccccc############################## DISOP:02AL 1-3, 283-288| PSIPRED ccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHccccEEEEEccccEEcHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccEEEEEccccHHHHccccccHHHHEEcccccccccccccccccccccEEEEEEccccEEEEHHHHHHccccEEEEEEccccccccHHHHHHHHHHcccEEEEccEEEEEEcccccccccccccccccccccHHHHHcccccccc //