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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57260.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  154/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->164 1udcA PDBj 9e-13 34.0 %
:RPS:PDB   2->313 1db3A PDBj 4e-19 14.3 %
:RPS:SCOP  2->313 1sb8A  c.2.1.2 * 1e-27 23.3 %
:HMM:SCOP  2->317 1eq2A_ c.2.1.2 * 4.6e-44 31.0 %
:RPS:PFM   3->169 PF01370 * Epimerase 7e-09 40.5 %
:HMM:PFM   3->190 PF01370 * Epimerase 3.1e-28 32.4 182/238  
:BLT:SWISS 1->337 Y2073_MYCBO 7e-16 35.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57260.1 GT:GENE BAD57260.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2576453..2577520 GB:FROM 2576453 GB:TO 2577520 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57260.1 LENGTH 355 SQ:AASEQ MRVVVVGATGNIGTAVVDALRGEPEVDSIVGVARRGPGELPPGVEFHRADIRTDDLVAAFRGADAVVHLAWLFQPTHRPADTWDNNVIGAERVLAAASAAGVRTLVCASSVAAYSPARDDEPVRETWPTDGWPLAAYPREKAYVERVLDAFERAHLEMRVVRMRPSFVFQRTSASQQRRLFAGPLVPNALVRPGLPILPVPKGLRFQAVHSADAGRAFAHAVVLPVRGAFNLAAPPALDRDRLAELFGARPVDVPAGLVRGALSVGWRLRLVPATPGLFDTVLRLPILDTTRAHDELNWTPRHSAVEALREMLTGLHDGAGGATPPLAADAGGPWRVREFASGVGGRDSVDRFVA GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 1->337|Y2073_MYCBO|7e-16|35.6|267/854| BL:PDB:NREP 1 BL:PDB:REP 1->164|1udcA|9e-13|34.0|159/338| RP:PDB:NREP 1 RP:PDB:REP 2->313|1db3A|4e-19|14.3|308/335| RP:PFM:NREP 1 RP:PFM:REP 3->169|PF01370|7e-09|40.5|158/232|Epimerase| HM:PFM:NREP 1 HM:PFM:REP 3->190|PF01370|3.1e-28|32.4|182/238|Epimerase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 2->313|1sb8A|1e-27|23.3|292/341|c.2.1.2| HM:SCP:REP 2->317|1eq2A_|4.6e-44|31.0|287/307|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 216 OP:NHOMOORG 161 OP:PATTERN -----------------------11------1-----------------1------------------ --1-2--1------13311-13113111111224442214-22111---22-111-1---112-232233------------2-------------------------------------------------1---11112---2-------------------1-------1------------------------------------------------------------------------------------------------------------------11------------------------1----------1----------------------------------------------11--11----------1-1-------2-------------------1-----11----------------1------1-------------------------------------------------------------1-------------------------------------------------------------5-1--------------------1111351--------------------------1111-------------------------------1-12------1111-1-1111111111-1111111111111--11-111111---1-11111111111111--111111----------------------------------------------------------------1--1--1-----------------1-----------------------------11----------------------------------------------------- ------------------------------------------------------------------------------------------21---------------1------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 329 STR:RPRED 92.7 SQ:SECSTR EEEEEETTTcHHHHHHHHHHHHTTTETcEEEEEccccEEEcccccccHHHHHHHHHHHcccEEEEcccccTTTTTTccHHHHHHHHTHHHHHHHHHHHHTTcTTTcEEEEEEEGGGGTTcccccccTTcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEcTTccTTcHHHHHHHHHHHHHTTccccEEEccTTcEEccEEHHHHHHHHHHTTcccccccEEEcccccEEHHHHHHTTTEEEEEEccGGGcEEEEEEEcccccTTccTTcEEEEEcGccccHHHHHHHcccccccHHHHHHHHHTTcccccHHHHHHTcc########################## DISOP:02AL 355-356| PSIPRED cEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccccccEEEEcccccHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEcccEEccccccccccHHHHHHHHHHHcccccEEEEcccccEEEEEEHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccccHHHHHHHHc //