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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57266.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  59/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:315 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->93 2hdwB PDBj 6e-05 33.9 %
:RPS:PDB   7->156 1cqzB PDBj 1e-09 18.1 %
:RPS:SCOP  1->156 2jbwA1  c.69.1.41 * 1e-09 15.6 %
:HMM:SCOP  12->301 1mpxA2 c.69.1.21 * 2e-37 27.1 %
:RPS:PFM   36->78 PF12146 * Hydrolase_4 2e-06 65.9 %
:HMM:PFM   34->95 PF12146 * Hydrolase_4 2.9e-12 36.1 61/79  
:HMM:PFM   65->286 PF00561 * Abhydrolase_1 8.5e-10 21.4 206/231  
:BLT:SWISS 30->145 YPT2_ECOLX 1e-12 32.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57266.1 GT:GENE BAD57266.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2582322..2583269) GB:FROM 2582322 GB:TO 2583269 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD57266.1 LENGTH 315 SQ:AASEQ MSTRTEMAFDSHGTTCHAWYFHGGDSPFAGERGRPVVVMAHGFGGTKDSGLEPFARRLAAAGLAVFAFDYRGFGSSEGQPRQRVSMRGQVEDYRAAIAAAGRAPGADPARIVLWGVSQSGGHALTLAAERADVCAVIALVPMVSGLAAGRHAFAQRGAAPMAAATLAGLRSAVATRLGAAPTMMPLVGRPGERAALTAPGYYESYRALAGPTWRNEVDAAVGLELGGYRADRHADRITAPVLVQIADFDRAAPAHAAAKAAFAARAEVRHYPCDHFDVFAGNPWFDPVVDHQLRFLTRKLGSAGQPAPATAEAAE GT:EXON 1|1-315:0| BL:SWS:NREP 1 BL:SWS:REP 30->145|YPT2_ECOLX|1e-12|32.2|115/286| SEG 95->111|aaiaaagrapgadpari| SEG 158->167|aapmaaatla| SEG 246->266|adfdraapahaaakaafaara| SEG 306->314|papataeaa| BL:PDB:NREP 1 BL:PDB:REP 35->93|2hdwB|6e-05|33.9|59/318| RP:PDB:NREP 1 RP:PDB:REP 7->156|1cqzB|1e-09|18.1|144/541| RP:PFM:NREP 1 RP:PFM:REP 36->78|PF12146|2e-06|65.9|41/79|Hydrolase_4| HM:PFM:NREP 2 HM:PFM:REP 34->95|PF12146|2.9e-12|36.1|61/79|Hydrolase_4| HM:PFM:REP 65->286|PF00561|8.5e-10|21.4|206/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 1->156|2jbwA1|1e-09|15.6|147/359|c.69.1.41| HM:SCP:REP 12->301|1mpxA2|2e-37|27.1|280/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 125 OP:NHOMOORG 83 OP:PATTERN --------111111---------1------1------------------------------------- ----2---------1-1----3--22-----132123171------------------------------1-----------1-----------------------------------------------------1--------1------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------1----------------------------------2--------1-------------------------------------------------------------------------1-2-1--1-----11--------2---2-1------1------1-------------------------2-1----------------------1--1------------------------------1---------------------1-----------------------1---11--1--1--1---------1----------------------------------------1---------------------------1------------------3332212-----11-1-------------------------------------------------------------------------------------------------------------- ---------------------1-3-41--------------------111-3-3------------------1----------------------------11-------------------------------------------------------------------------22------1---1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 244 STR:RPRED 77.5 SQ:SECSTR cccEHHcccccccEEEEEEcccccEEEEEEEccccEEEEEccTTccGGGGGHGHHHHHHHTTcEEEEEEcTTcTTcccccccGGGcHHHHHHHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHccTEEEEEEEccccccccTTccHHHHHHHHHHccccTTcEEEEEEcTTccEEEEEEccHHHHHHTTccHHHTTccHHHHHHHHHHcccccccHHHHHHcccccTTTGGGccEEEE####################################################################### DISOP:02AL 306-315| PSIPRED ccccEEEEEEcccEEEEEEEEcccccccccccccEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHccccccHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHccccEEEEEccccccccHHHHHHHHHccccEEEEEccccHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccc //