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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57270.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  584/915 : Eukaryota  134/199 : Viruses  0/175   --->[See Alignment]
c.3.1c.4.1
:456 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   96->357 3iwaA PDBj 3e-11 31.5 %
:RPS:PDB   24->416 2cduB PDBj 1e-23 17.0 %
:RPS:SCOP  4->43 1djnA3  c.4.1.1 * 6e-04 35.0 %
:RPS:SCOP  23->206 1fcdA1  c.3.1.5 * 3e-10 20.0 %
:RPS:SCOP  224->370 1gv4A1  c.3.1.5 * 3e-15 18.4 %
:HMM:SCOP  15->361 1coyA1 c.3.1.2 * 2e-27 28.6 %
:HMM:PFM   24->329 PF07992 * Pyr_redox_2 3.4e-30 36.4 187/202  
:BLT:SWISS 19->403 YUMB_BACSU 8e-33 28.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57270.1 GT:GENE BAD57270.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2586015..2587385 GB:FROM 2586015 GB:TO 2587385 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57270.1 LENGTH 456 SQ:AASEQ MAGGEPKRRRWSIVPQTQAASRRRVVIVGSGFAGFTCAKHLCRTLAWTGEDEVEIVLVTPNDYMLYTPLLPDVAGGLIDPRFVVISLADSLPRVRLVVATAESVDLANKTITVTSPHHAPRELSWDRLVLTPGSVTRLFDVPGLAEHARGLKTVAEALYLREQLLRQLELADHEDDPEVRRARRTFVVVGASYAGTELVAQLRALADTYADRRGFAREEIRFLLLDTAERVMPEVGERLGDKVLEVLRGRGIDIRLQTTLAELDDDRVVLTDGTVVPTHTVAWVTGVTGAPILATLGLPMERGRLVVDEYLRVPGHPDVFAGGDAAAVPDLTAPGTITPPTAQHASRQGKALARNVAASLGMGNEAPYRHKDMGLVVDLGPGFAVANPLGVRLSGLPAKVVARAYHTYAVPRGVNRWAITLTYLTNAVTPRPLSLLGLVSPEEASFGMSEGIPAHR GT:EXON 1|1-456:0| BL:SWS:NREP 1 BL:SWS:REP 19->403|YUMB_BACSU|8e-33|28.0|372/406| SEG 155->171|aealylreqllrqlela| BL:PDB:NREP 1 BL:PDB:REP 96->357|3iwaA|3e-11|31.5|235/397| RP:PDB:NREP 1 RP:PDB:REP 24->416|2cduB|1e-23|17.0|365/448| HM:PFM:NREP 1 HM:PFM:REP 24->329|PF07992|3.4e-30|36.4|187/202|Pyr_redox_2| RP:SCP:NREP 3 RP:SCP:REP 4->43|1djnA3|6e-04|35.0|40/233|c.4.1.1| RP:SCP:REP 23->206|1fcdA1|3e-10|20.0|165/186|c.3.1.5| RP:SCP:REP 224->370|1gv4A1|3e-15|18.4|141/224|c.3.1.5| HM:SCP:REP 15->361|1coyA1|2e-27|28.6|294/372|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 1319 OP:NHOMOORG 738 OP:PATTERN ------121111112----1----3--111-1-----1----1-----1-----------------11 2131321111111133322-221123222221233333A71324122121112211111132112335542-----------2--1--111--1---11-1111241221--------------1111221111-12221----113651334123322212233136652121111121-11111-----22344444433344443412332344311112122222222321111111111111112221211-11-1---221122-1-1112221111-------------------------------11---1111--1---------1--1---------1--1--2----1--11----11---1-21--------325212111112111111111111-11211112112-1111343111221----12-2211--122222222-1111-1---------------------------------1-1111124442542111144731111-15231262-1111-31--111-2-22-11111----------111-1------1---112----211---112122--1---1-----1-1-------1--1-2211212--11111111112311122133222--1----------21111111111111111-1111111111111-111111111111112111111111111112111111111111111111111---------1111121111111-11111-1---22222-1---1122222-1-213131111-11-11111-222211111211-11111111111----1---111111----------------------------------------------13- --11421-211-123433134434441332323121212112212233364554222323321112332212-212223322222122-33333322322321454-221-----------------------------------------------1-111-11--------112331M21133656A272342122- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 441 STR:RPRED 96.7 SQ:SECSTR ##########ccTTcccTEccccEEEEEcccHHHHHHHHHHHHHTcEEEEEcccccccccGGHHHHHTTccGGGcGGGGccccHHHHHHTTcEEEccEEEEEEEGGGTEEEEEETTTccEEEEEccEEEEcccEEEcccccTTTTcTTEEcccHHccTTccTEcEEcccHHHHHHHHHHGGGccEEEEEcccHHHHHHHHHHHTTTcEHHTTTHTTHTTcEEEEEccccTTTTTccHHHHHHHHHHHHHTTEEEEEcccEEEEEEETTEETTccEEEEcEEEEcccEEEccGGGTTTcccTTccccccTTccHcccTTEEEcGGGccEEEGGGTEEEccccHHHHHHHHHHHHHTccccccccccccccEEEEETEEEEEccHHHHHHTTcccEEEEEEEEcccTTcccccEEEEEHHHHHHHHHHHHTTccccHHHHHccc###cHHHHHHHc## DISOP:02AL 1-24, 437-449, 453-456| PSIPRED ccccccccEEEccccccccccccEEEEEcccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccHHHHHcccccHHHHHccHHHHHccccEEEEEEEEEEccccEEEEEccccccEEEEccEEEEEcccEEcccccccccccccEEccHHHHHHHHHHHHHHHHHHcccccHHHHHcccEEEEEcccHHHcccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEccEEEEccccEEEEEEEEEccccccHHHHHHcccccccccEEEcccccccccccEEEEEEEEEEccccccccEEEEEcHHHHHHHHHHHHHHHHHHcccccccEEEcccEEEEEEccccEEEEEccEEEccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccccc //