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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57271.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  862/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:253 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   7->252 1e6wD PDBj 1e-83 65.0 %
:RPS:PDB   1->253 2ae1A PDBj 5e-33 18.0 %
:RPS:SCOP  1->253 1bdbA  c.2.1.2 * 8e-36 24.8 %
:HMM:SCOP  1->247 1zemA1 c.2.1.2 * 5.9e-60 40.3 %
:RPS:PFM   7->176 PF00106 * adh_short 9e-12 39.8 %
:HMM:PFM   7->175 PF00106 * adh_short 1e-31 26.3 156/167  
:BLT:SWISS 7->252 HCD2_RAT 3e-83 65.0 %
:PROS 146->174|PS00061|ADH_SHORT

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57271.1 GT:GENE BAD57271.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2587753..2588514) GB:FROM 2587753 GB:TO 2588514 GB:DIRECTION - GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID BAD57271.1 LENGTH 253 SQ:AASEQ MQIGNSVAVVTGGASGLGLATVKELHRNGGKVVIIDLPSSDGESVAKELGDGVVFAAADVTNEEQVSAALDAAQELGTLRIAVNCAGIGNAIKTVGKKGAFPLADFTKVVNVNLIGTFNVIRLAAERIAATDPEGEERGVIINTASVAAFDGQIGQAAYSASKGGIVGMTLPIARDLAALAIRVVTIAPGLFHTPLFATLPDEAIASLGAQVPHPSRLGDPGEYAALARHIVENPMLNGETIRLDGAIRMAPR GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 7->252|HCD2_RAT|3e-83|65.0|246/261| PROS 146->174|PS00061|ADH_SHORT|PDOC00060| BL:PDB:NREP 1 BL:PDB:REP 7->252|1e6wD|1e-83|65.0|246/255| RP:PDB:NREP 1 RP:PDB:REP 1->253|2ae1A|5e-33|18.0|244/252| RP:PFM:NREP 1 RP:PFM:REP 7->176|PF00106|9e-12|39.8|161/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 7->175|PF00106|1e-31|26.3|156/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 1->253|1bdbA|8e-36|24.8|246/267|c.2.1.2| HM:SCP:REP 1->247|1zemA1|5.9e-60|40.3|238/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 10433 OP:NHOMOORG 1101 OP:PATTERN 111-1-3464645442-6-2---172262428-1---------11144--322-11--1-22533132 BFK5K2-4449231ZrcGG-Gf44WxGFGGGQfrvtSp**3U7*CFB94962MEH85711F9Q3DCLTOHA1111---1165M11111566726111--74I379X5P4A11111111111111333348521734DDDCD222C578CA54632221--3222737C8I31-11111-1111D9789441E5FAAAAABBCBACACDBDAKKCC9995DCIGA8666665AU655555435555554B786881A17916-118B5579536487666667454533322222222222464456666666622211122264356A555444454763552464433-13522265111225332325413528PDDJ11111B7gTU457PENKICDFCBBDDFEM-DFKBAaEINfP2dRRFZSYgjdgbIR8IBIEOC9BDDBH33333333GHH858971111111111112133-2211221211116FbgD5EQLHLjVaeddCFEFESShcIHHG8JqQnLreS36KJGG9ECCOHNDRN8D84223631111111217JE54H68311211222214651943534865BH221322212121212111111111211557785B8B7GA45455549A755476755581-3334511----99CB3D69CC999899A-CA9AA799BAC9AA99A98HJI5346A7566667677656565J8868868118777777777771-162422267662BEJC111616111111462CDEHE5D498F5KLDICJLNFIEMKHKHH4333343331334C4344369467A9B8A8844452221123877677--------1-3--------3-1------2-------3242155565282 1111JBB-523-49CRaUPRSZRfVdZEG5E8CDEBBNFKEKJFFELJNTWmtvIMMGGJCH53832235224142212223558916-EUCaCQFCAC7B4AGD6-8B8sFL98C351424A5EC2A1EI7-78B1547746CB24433A357474CMRTF3JJ5B999M6BMD5463M1114E9TPoQUF9AG8888 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 100.0 SQ:SECSTR TccTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHHTccEEEEEccTTcHHHHHHHHHHHHHTTTcccEEEEcccccccccGGGGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTcEETccEEEEEEccGGGTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHcHHHHHHHHHTccccccccHHHHHHHHHHHHcGGGTTccccEEEEcTTGGGccc PSIPRED ccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccEEEEcccEEEccc //