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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57274.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  206/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.58.19
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   81->360 1cg2A PDBj 2e-25 33.2 %
:RPS:PDB   8->264 1cg2A PDBj 3e-30 30.4 %
:RPS:SCOP  20->206,324->360 1cg2A1  c.56.5.4 * 5e-28 27.3 %
:RPS:SCOP  183->261 1fnoA3  d.58.19.1 * 8e-15 20.3 %
:HMM:SCOP  19->376 1cg2A1 c.56.5.4 * 1e-43 32.8 %
:HMM:PFM   82->371 PF01546 * Peptidase_M20 7.6e-23 36.6 161/171  
:BLT:SWISS 81->360 CBPG_PSES6 7e-25 33.2 %
:PROS 81->90|PS00758|ARGE_DAPE_CPG2_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57274.1 GT:GENE BAD57274.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2592163..2593314) GB:FROM 2592163 GB:TO 2593314 GB:DIRECTION - GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD57274.1 LENGTH 383 SQ:AASEQ MIRRVDGEHDTLVRAGEALPDMVARLADLVGCESPSDSPADLRRCADLLVSWLAPLLPHRVEVLERDGLPHVLAAAAHPTVLLLGHFDTVWPLGTLTDWPFTVRDGIARGPGVFDMKAGIVQLVTALALHGDPGRVSVLLTGDEEIGSRSAWTLIEEQARRAGAVLVCEPAADGGAVKVGRKGIANYDIEIRGRAAHAGLEPERGINAGVELAHQILALTALADRDTTVTPTVLSAGTTGNTVPERAHCHVDVRSWTTAAMADVDRALTGLRPHLPGAEVVVTGGIDRLPFEERAAAGLLAHAEAAADELGLGPLATATAGGVSDGNISAAAGVPTLDGLGAIGGYPHARDEHVQVHTMPRQTALLTELLARLAQRRPGRLER GT:EXON 1|1-383:0| BL:SWS:NREP 1 BL:SWS:REP 81->360|CBPG_PSES6|7e-25|33.2|277/415| PROS 81->90|PS00758|ARGE_DAPE_CPG2_1|PDOC00613| SEG 292->322|eeraaagllahaeaaadelglgplatatagg| SEG 361->377|rqtalltellarlaqrr| BL:PDB:NREP 1 BL:PDB:REP 81->360|1cg2A|2e-25|33.2|277/389| RP:PDB:NREP 1 RP:PDB:REP 8->264|1cg2A|3e-30|30.4|257/389| HM:PFM:NREP 1 HM:PFM:REP 82->371|PF01546|7.6e-23|36.6|161/171|Peptidase_M20| RP:SCP:NREP 2 RP:SCP:REP 20->206,324->360|1cg2A1|5e-28|27.3|224/276|c.56.5.4| RP:SCP:REP 183->261|1fnoA3|8e-15|20.3|79/113|d.58.19.1| HM:SCP:REP 19->376|1cg2A1|1e-43|32.8|250/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 278 OP:NHOMOORG 220 OP:PATTERN ----------------------1--------1-------------1-------1---1---1------ 111-1-------------------------------13--------1----------4--1-1-1-2---------------1-------------------------1---------------------------33311---22-11-11-------------------------------11111---------------------21----------2-1-1111112----------------1------2----1---1111--------------------------------------------------------1-------------11---------------1----1---------------2221---1-1-444--11111-11111111111---2--2-312112111112111112-111---1-1111111111111-11-1-1111-11---------------------1-1-1121211112------------------------2112--112--1--2-1-3---------1-----------1---1---1-----------------1111-1-1-11-----------------11-22--1---------1------------1--------1------1-------1--------------------------------111----1-----------------------------------------------1111----111------------1------------1111--11----11413-----------113-----11-11-------------------------------------------------------------1---11111-1- -------------1-------------------111-------------------------------------1----------------2------------------------------------------------------------------------2------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 360 STR:RPRED 94.0 SQ:SECSTR HHcccccccHHHHHHHHHHHHHHHHHHHHHTccccTTcHHHHHHHHHHHHHHHHHTTcEEEEccTTcccEEEEEEcccccEEEEEEccccccTTHHHHcccEEETTEEEcTTTTTTHHHHHHHHHHHHHcccccEEEEEEEccGGGTTTTTHHHHHHHHHHccEEEEcccEETTcEEEcEEcEEEEEEEEEEcccEETTccGGGcccHHHHHHHHHHHHGGGccTTEEEEEEEEEEcccTTEEccEEEEEEEEEEccHHHHHHHHHHHHHHTccEEEEHHHHHHHHHcEEHcHHHHHHHHHHHHHHHHHTTcccEEEcccccccTHHHHGGGcccEEcccccEEcTTcccccEEEGGGHH####################### DISOP:02AL 376-383| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccEEEEEEcccccEEEEEEcccccccccccccccEEEEccEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEcccccccEEEEEEccEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccEEccEEEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEEEEccccEEccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccEEEEEccccccccccccEEcHHHHHHHHHHHHHHHHHHHccccccccc //