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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57280.1
DDBJ      :             putative anti-anti-sigma factor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:161 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   40->142 1auzA PDBj 3e-04 9.9 %
:RPS:SCOP  40->143 1th8B  c.13.2.1 * 2e-04 11.8 %
:HMM:SCOP  29->141 1h4xA_ c.13.2.1 * 4e-08 22.5 %
:HMM:PFM   35->118 PF01740 * STAS 8.8e-08 22.6 84/117  
:BLT:SWISS 39->140 Y1365_MYCTU 2e-06 29.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57280.1 GT:GENE BAD57280.1 GT:PRODUCT putative anti-anti-sigma factor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2598805..2599290 GB:FROM 2598805 GB:TO 2599290 GB:DIRECTION + GB:PRODUCT putative anti-anti-sigma factor GB:PROTEIN_ID BAD57280.1 LENGTH 161 SQ:AASEQ MDSALESRLAQAAHRLPAPEGATTANRRLFSRLRRRGPAVVLSPRGAADAYTLDLWRCAVREAVDTAAASACALIVDTSRIDFLSCRALVVLAEEARRAAERGVPVSLVTPNRTIARIAAVDPATVALPIHSTVVSALTALRLRDSQDTSGRAGTPLALGN GT:EXON 1|1-161:0| BL:SWS:NREP 1 BL:SWS:REP 39->140|Y1365_MYCTU|2e-06|29.7|101/100| SEG 27->36|rrlfsrlrrr| SEG 87->102|ralvvlaeearraaer| RP:PDB:NREP 1 RP:PDB:REP 40->142|1auzA|3e-04|9.9|101/116| HM:PFM:NREP 1 HM:PFM:REP 35->118|PF01740|8.8e-08|22.6|84/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 40->143|1th8B|2e-04|11.8|102/115|c.13.2.1| HM:SCP:REP 29->141|1h4xA_|4e-08|22.5|111/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 101 STR:RPRED 62.7 SQ:SECSTR #######################################EEEcccccccTTHHHHHHHHHHHHHc##cccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccGGGTcccccGGGTGGGTc################### DISOP:02AL 1-3, 16-24, 141-154| PSIPRED cccHHHHHHHHHHHcccccccccccccEEEEEEEEcccEEEEEEEEEEEEccHHHHHHHHHHHHHHHcccccEEEEEcccccEEcHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHEEEccccHHHHHHHHHHHccccccccccccccccc //