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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57292.1
DDBJ      :             putative ferredoxin
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  56/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:75 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->68 1jnrB PDBj 2e-07 40.4 %
:RPS:PDB   12->68 1dwlA PDBj 6e-06 26.8 %
:RPS:SCOP  11->69 1jnrB  d.58.1.5 * 4e-08 35.6 %
:HMM:SCOP  11->68 2fug91 d.58.1.5 * 5.2e-13 40.4 %
:HMM:PFM   12->33 PF00037 * Fer4 4.1e-05 61.9 21/24  
:HMM:PFM   48->67 PF00037 * Fer4 4.7e-08 40.0 20/24  
:BLT:SWISS 12->66 Y514_METJA 1e-09 42.3 %
:PROS 51->62|PS00198|4FE4S_FER_1
:REPEAT 2|14->38|48->69

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57292.1 GT:GENE BAD57292.1 GT:PRODUCT putative ferredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2609562..2609789) GB:FROM 2609562 GB:TO 2609789 GB:DIRECTION - GB:PRODUCT putative ferredoxin GB:PROTEIN_ID BAD57292.1 LENGTH 75 SQ:AASEQ MTLVNQRADIPVTIDESLCIEGCTLCVEICPLDSLAINPDNGKAYMHVDECWYCGPCAARCPTGAVTVNMPYLLR GT:EXON 1|1-75:0| BL:SWS:NREP 1 BL:SWS:REP 12->66|Y514_METJA|1e-09|42.3|52/250| PROS 51->62|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|14->38|48->69| BL:PDB:NREP 1 BL:PDB:REP 11->68|1jnrB|2e-07|40.4|57/149| RP:PDB:NREP 1 RP:PDB:REP 12->68|1dwlA|6e-06|26.8|56/59| HM:PFM:NREP 2 HM:PFM:REP 12->33|PF00037|4.1e-05|61.9|21/24|Fer4| HM:PFM:REP 48->67|PF00037|4.7e-08|40.0|20/24|Fer4| RP:SCP:NREP 1 RP:SCP:REP 11->69|1jnrB|4e-08|35.6|59/149|d.58.1.5| HM:SCP:REP 11->68|2fug91|5.2e-13|40.4|57/0|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 59 OP:NHOMOORG 58 OP:PATTERN -----------------------------------------------------1-------------- ----1---------111-------------------1-11---------------------------1---------------------------------------------------------------------------------------------------1-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------1-1-1----1-------------21-11-11-1---------------1--------------------------1------------------------------------------111111-----11--------1--1-1---11----------------------------------------1----11------------1---1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111------111-11-1--1--1----------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 67 STR:RPRED 89.3 SQ:SECSTR #####cccEEEEEEccccccTcccGGGGTcTTTEEEEEccccEEEccTcccGGGGTGGGGcTTccEEEcTTc### DISOP:02AL 75-76| PSIPRED ccccccccEEEEEEcHHHHHHHHHHHHHHcccccEEEEccccEEEEEHHHccccccHHHHcccccEEEccccccc //