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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57307.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  30/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:239 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   86->232 2ov9D PDBj 2e-10 31.7 %
:RPS:PDB   14->130 3cv2B PDBj 9e-04 11.2 %
:RPS:PDB   125->234 3dkzB PDBj 4e-12 14.2 %
:RPS:SCOP  136->238 2hboA1  d.38.1.5 * 7e-15 21.4 %
:HMM:SCOP  110->234 1zkiA1 d.38.1.5 * 2.5e-23 26.6 %
:HMM:PFM   153->222 PF03061 * 4HBT 2.7e-11 24.3 70/79  
:HMM:PFM   7->31 PF02900 * LigB 0.00077 24.0 25/272  
:BLT:SWISS 154->236 THEM4_XENLA 4e-09 42.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57307.1 GT:GENE BAD57307.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2623021..2623740) GB:FROM 2623021 GB:TO 2623740 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57307.1 LENGTH 239 SQ:AASEQ MAGATHRSAPGNQPDTVVLMTEDHTADPLPTAEHHEGGFRPMWEQMVRDSDFSRGGPYFGEFVEQVRILMDQARVAAPSDDLALELIGQLKELNAKLADAVVDEWSTPTWTRHDLPARGNVTLPPFRVQRASRKGVETAITFRTFHLGGNAAAHGGQMAVGFDELCGMAAAIHAGSVTRTASLTIDYRSITPLDKELTLRSWVENQEGRKVWVRATLHDGERLCAEAHGLFIVLRPGQA GT:EXON 1|1-239:0| BL:SWS:NREP 1 BL:SWS:REP 154->236|THEM4_XENLA|4e-09|42.7|82/222| BL:PDB:NREP 1 BL:PDB:REP 86->232|2ov9D|2e-10|31.7|142/190| RP:PDB:NREP 2 RP:PDB:REP 14->130|3cv2B|9e-04|11.2|116/524| RP:PDB:REP 125->234|3dkzB|4e-12|14.2|106/120| HM:PFM:NREP 2 HM:PFM:REP 153->222|PF03061|2.7e-11|24.3|70/79|4HBT| HM:PFM:REP 7->31|PF02900|0.00077|24.0|25/272|LigB| RP:SCP:NREP 1 RP:SCP:REP 136->238|2hboA1|7e-15|21.4|103/142|d.38.1.5| HM:SCP:REP 110->234|1zkiA1|2.5e-23|26.6|124/0|d.38.1.5|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 61 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- ----1---------35311-12113211111322422244-3--------------------1-------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 225 STR:RPRED 94.1 SQ:SECSTR #############HHHHHHHHHHHHHHHHHHHHHTcccEEEccGGGHHH#HHHHHHHHHTTccccTTcccTTcccccHHccccccccHHHHHHcTTHHHHHHHHHHHHTTccccccEEEEEcccTcEEEEEcccEEEEEEcccGGGccTTccccHHHHHHHHHHHHHTTTTTcTTccGEEEEEEEEEccEccccccEEEEEEEEEEcccEEEEEEEEEcTTcEEEEEEEEEEEcETTEE DISOP:02AL 1-11, 238-239| PSIPRED cccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHccccEEEEEccccEEEEEEEEcHHHcccccEEHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEccccccEEEEEEEEEEEccEEEEEEEEEEEccEEEEEEEEEEEEEccccc //