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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57317.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  29/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.17.4
:160 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->134 2chcC PDBj 7e-07 34.2 %
:RPS:PDB   3->128 3b8lA PDBj 2e-19 20.2 %
:RPS:SCOP  6->126 2chcA1  d.17.4.25 * 3e-22 32.1 %
:HMM:SCOP  1->137 3stdA_ d.17.4.1 * 1.3e-27 40.7 %
:HMM:PFM   108->138 PF08447 * PAS_3 0.00092 41.9 31/91  
:BLT:SWISS 2->136 BAIE_EUBSP 1e-23 40.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57317.1 GT:GENE BAD57317.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2631260..2631742) GB:FROM 2631260 GB:TO 2631742 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57317.1 LENGTH 160 SQ:AASEQ MDLAAIEDVRRLKYRYFRTLDLKLWDEFADTLAEDAVGRYGTHALGEPLAFEGRAAITEFMRANLGPAIVTVHIAHHPEITVDGDTATGSWAFEDTVIATEFGALIRGAGYYSDRYRRDADGNWRIVETGYRRIYESSQSLADTPSFALLSNMWATPTGQ GT:EXON 1|1-160:0| BL:SWS:NREP 1 BL:SWS:REP 2->136|BAIE_EUBSP|1e-23|40.8|130/166| BL:PDB:NREP 1 BL:PDB:REP 9->134|2chcC|7e-07|34.2|114/159| RP:PDB:NREP 1 RP:PDB:REP 3->128|3b8lA|2e-19|20.2|119/140| HM:PFM:NREP 1 HM:PFM:REP 108->138|PF08447|0.00092|41.9|31/91|PAS_3| RP:SCP:NREP 1 RP:SCP:REP 6->126|2chcA1|3e-22|32.1|112/167|d.17.4.25| HM:SCP:REP 1->137|3stdA_|1.3e-27|40.7|135/0|d.17.4.1|1/1|NTF2-like| OP:NHOMO 45 OP:NHOMOORG 29 OP:PATTERN -------------------------------------------------------------------- --------------12211-12--2111111222222124----------------------1-----------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22----------1-----------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 157 STR:RPRED 98.1 SQ:SECSTR HHHHHHHHHHHHHHHHHHHHTTccHHHHHTTEEEEEEEEEEcGGGTcccEEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEcTTTccEEEEEEEEEEEEEEETTEcEEEEEEEEEEccccccccccccHHHHccHHHHHH### DISOP:02AL 1-2, 158-160| PSIPRED ccHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccEEEEcccccccccEEccHHHHHHHHHHHHcccccEEEEcccEEEEEEccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccccccccccccccccc //