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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57320.1
DDBJ      :             putative heme oxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  79/915 : Eukaryota  62/199 : Viruses  1/175   --->[See Alignment]
a.132.1
:224 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->214 1ni6C PDBj 5e-36 38.9 %
:RPS:PDB   8->214 1dveA PDBj 2e-30 35.3 %
:RPS:SCOP  11->214 1dveA  a.132.1.1 * 6e-64 37.3 %
:HMM:SCOP  9->216 1wovA1 a.132.1.1 * 3.6e-59 44.4 %
:RPS:PFM   12->213 PF01126 * Heme_oxygenase 1e-30 41.0 %
:HMM:PFM   10->213 PF01126 * Heme_oxygenase 3.4e-69 41.2 204/205  
:BLT:SWISS 12->214 HMOX1_CHICK 1e-36 37.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57320.1 GT:GENE BAD57320.1 GT:PRODUCT putative heme oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2633044..2633718) GB:FROM 2633044 GB:TO 2633718 GB:DIRECTION - GB:PRODUCT putative heme oxygenase GB:PROTEIN_ID BAD57320.1 LENGTH 224 SQ:AASEQ MPSKMSEAVPFSTRIRTATERQHAEAENSTFITDMLGGHLGIDSYHRYTGQLWFVYRALEARMDELAADPVAGPFIRPELARTAELERDLTALIGPEWRADLTPLPATAAYAARIEECAREWPAGYVAHHYTRYLGDLSGGQVIRGTAEKLWDLPRRGDGVRFYVFDDIPNPAAFKREYRALLDRLPVDELERRRVLDEGKRAFELNAAVFAELAAEFPVRRPS GT:EXON 1|1-224:0| BL:SWS:NREP 1 BL:SWS:REP 12->214|HMOX1_CHICK|1e-36|37.9|203/296| SEG 100->113|adltplpataayaa| BL:PDB:NREP 1 BL:PDB:REP 1->214|1ni6C|5e-36|38.9|208/223| RP:PDB:NREP 1 RP:PDB:REP 8->214|1dveA|2e-30|35.3|207/214| RP:PFM:NREP 1 RP:PFM:REP 12->213|PF01126|1e-30|41.0|200/203|Heme_oxygenase| HM:PFM:NREP 1 HM:PFM:REP 10->213|PF01126|3.4e-69|41.2|204/205|Heme_oxygenase| GO:PFM:NREP 3 GO:PFM GO:0004392|"GO:heme oxygenase (decyclizing) activity"|PF01126|IPR016053| GO:PFM GO:0006788|"GO:heme oxidation"|PF01126|IPR016053| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01126|IPR016053| RP:SCP:NREP 1 RP:SCP:REP 11->214|1dveA|6e-64|37.3|204/214|a.132.1.1| HM:SCP:REP 9->216|1wovA1|3.6e-59|44.4|207/0|a.132.1.1|1/1|Heme oxygenase-like| OP:NHOMO 240 OP:NHOMOORG 142 OP:PATTERN -------------------------------------------------------------------- -----11-1111-11------1--------------1111-----11--111-----1------1--1111-------------1-------------------------------------------------------------4222221111111111122212221111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------1111-1----------------------------------------1----11111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111------------------------------------------------- --------------2--------------------------------------------------------------------------1----11-------212--2--5522352132332522327I2-223-22221221-221121-323212----12---11---1---------1--------21--1-1 -----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 100.0 SQ:SECSTR ccccHHHcccHHHHHHHHHHHHHHHHHTcHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTGGGccTTTTccHHHHHHHHHHHHcTTHHHHccccHHHHHHHHHHHHHHHHcGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTccTTcTTcGGGccTTcccHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccTT DISOP:02AL 1-8, 222-224| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //