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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57322.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  54/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:505 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   114->185 3d70A PDBj 5e-04 16.7 %
:RPS:PFM   136->273 PF06738 * DUF1212 2e-07 30.1 %
:HMM:PFM   81->279 PF06738 * DUF1212 4e-40 26.9 193/193  
:HMM:PFM   345->432 PF06738 * DUF1212 2.6e-05 21.6 88/193  
:BLT:SWISS 383->483 Y627_YERPS 2e-05 34.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57322.1 GT:GENE BAD57322.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2634198..2635715) GB:FROM 2634198 GB:TO 2635715 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57322.1 LENGTH 505 SQ:AASEQ MGLDAISGGDDYIDRQRQRAARRPRLWPRRAPRLLEQAVGVLVADRQATADTIIAAPAPLQPIDLTDDAKVAEVLDLAVRVGEVVLASGTGVMDTTTQVRFIAATYGLSRCDVDVTYDSIRIWADRGPLLPPASTMRVVRYRSLDFTRLAAVDRLTRRIRHQVVPPAEARAALDAITTAPHPYARWVATFGWSLMAAAIAALLGADLLVTVLSFLTTAAIDRTNRALNRYGLPFFFQHMAGGLIAATPAILLSSLAEPLGIRVDATLIVAAGITVLLSGLQLVGSVQDAITGAPITAAARMLEVVMMTGGIVAGIALALRLGEVAGTTVPSIDLVSGRDITDLPVKLVAGAVAALAFALACYAERRALAAAAFGGAAGTICFLLVQYLGFGPVISSGVAATLVGMAGGLMARRAMTPPLVVAVAGITPLLPGLKVYRGLYAVLNDELLLGFNQLFAAFGVGCALAAGVTLGEWCDRTLRRPRILSRFGSLRKPVVRRKRRTASPG GT:EXON 1|1-505:0| BL:SWS:NREP 1 BL:SWS:REP 383->483|Y627_YERPS|2e-05|34.7|98/156| TM:NTM 9 TM:REGION 194->216| TM:REGION 237->259| TM:REGION 262->284| TM:REGION 288->310| TM:REGION 313->335| TM:REGION 341->363| TM:REGION 378->400| TM:REGION 414->436| TM:REGION 444->466| SEG 15->35|rqrqraarrprlwprraprll| SEG 48->59|atadtiiaapap| SEG 194->208|lmaaaiaallgadll| SEG 275->287|vllsglqlvgsvq| SEG 345->377|vklvagavaalafalacyaerralaaaafggaa| RP:PDB:NREP 1 RP:PDB:REP 114->185|3d70A|5e-04|16.7|66/276| RP:PFM:NREP 1 RP:PFM:REP 136->273|PF06738|2e-07|30.1|133/192|DUF1212| HM:PFM:NREP 2 HM:PFM:REP 81->279|PF06738|4e-40|26.9|193/193|DUF1212| HM:PFM:REP 345->432|PF06738|2.6e-05|21.6|88/193|DUF1212| OP:NHOMO 55 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- ---11121111111---11-11--1111111111111111----1-11----111-1-----11111-111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 66 STR:RPRED 13.1 SQ:SECSTR #################################################################################################################TccHHHHHHHHHTTcccccTTccE##EEcGGGGGHH####HHHHHHHHHTccHHHHHHHTTccHHHHHHHHH################################################################################################################################################################################################################################################################################################################################ DISOP:02AL 1-4, 17-25, 500-505| PSIPRED cccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHccccccccccHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccc //