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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57324.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  906/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:305 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   7->218 1vplA PDBj 2e-28 33.2 %
:RPS:PDB   1->203 2dwoA PDBj 3e-37 7.3 %
:RPS:SCOP  5->231 1b0uA  c.37.1.12 * 5e-42 22.5 %
:HMM:SCOP  7->212 1ii8.1 c.37.1.12 * 1.2e-59 37.7 %
:RPS:PFM   44->159 PF00005 * ABC_tran 2e-07 35.4 %
:HMM:PFM   44->159 PF00005 * ABC_tran 2.5e-16 35.7 112/118  
:HMM:PFM   26->55 PF03193 * DUF258 0.00063 31.0 29/161  
:BLT:SWISS 4->288 YHAQ_BACSU 2e-39 33.7 %
:PROS 131->145|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57324.1 GT:GENE BAD57324.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2637445..2638362) GB:FROM 2637445 GB:TO 2638362 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57324.1 LENGTH 305 SQ:AASEQ MSEVIRIRDLRKTFGHVTALDGLDLEVAEGEIHGFLGPNGAGKSTTIRILLGILRATAGQAELLGRDPWTDAVELHRELAYVPGDVTLWPSLSGGETIDLLARMRGGIDRARRDELIERFDLDPRKKARTYSKGNRQKVALVSAFASDVRLLLLDEPTSGLDPLMEQLFRDCVREAAARGTTVLLSSHILSEVEALCDRVTIIRAGRTVESGSLADLRHLSRTSITAELLGDPGDLSRIAGVDDIERDGDTLRCQVDSEHLGELIRVLGDTGVRSLTSAPPTLEELFLRHYHVDGADEAGQVVRA GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 4->288|YHAQ_BACSU|2e-39|33.7|282/298| PROS 131->145|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 7->218|1vplA|2e-28|33.2|211/238| RP:PDB:NREP 1 RP:PDB:REP 1->203|2dwoA|3e-37|7.3|192/449| RP:PFM:NREP 1 RP:PFM:REP 44->159|PF00005|2e-07|35.4|113/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 44->159|PF00005|2.5e-16|35.7|112/118|ABC_tran| HM:PFM:REP 26->55|PF03193|0.00063|31.0|29/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 5->231|1b0uA|5e-42|22.5|227/258|c.37.1.12| HM:SCP:REP 7->212|1ii8.1|1.2e-59|37.7|204/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 39705 OP:NHOMOORG 1166 OP:PATTERN SRLBJIEGPPPMOLPIhDIKMMLYuLObkUcUH9BBB8DCC98RUFVaEI*nbALaMUVIQFIBT176 MPtO*ZaZgggSVRSQOMM-MeAAW*MMMMMLrkjmw***V*Y*x*vjfgaM**yMSaDDww*d*m****cSQPPvUSRI*am85749JKJL3FBEG--CCQFFHVEWPO36666665446666AMNCKTGFMLOJmrruzGFHzajVasSRYVXRSHCIDLDWTUgqqpM7HCEA77G7EA7hYYSOcS6XXo********p*******q**or***Zhp*oaiknoiii**PVWYXYWSXXWWVWWOPKQOkTVQnkOMMMThgEFxxUNMOSLXZbfdhjaXfhegggdgddgieheWVVVUWWWXWWVVncdSSTfdfee*hzyrqrustsYqZhvppUWWX*gWfd*XjNI**YZVVccNXdTfdIMQWEZUSSNGFBBFXR***SPm****************-ei*bX*e***P7**************JGK**********NNNNNNNNuafJOdRu55534222224545776476455556374CDEFBD***v*******y***w********k*******wBMsuo*erfj******WcaHRDGYQCBDDCDDOKKXiaWt*ITPndQflZWcITRUQRTbNRWWUZm*Ws8HEI89BCCA9565665555CJ9BBLKbbfGkNRGLEjPMOPNGNZPMOOROXPQUU2-BHPLJ-1-111zl**Szoikkjjmjkhj-jjgkkhlkjjkljhhhhhg*****VSQaaWYYYZYZYYXZXYX*dbXeecfL4z***********22EIAB9ABJJJIQFug*SRRPRQBGFEFMLPTHJIHJBHEHMfRqqrol***rz*qrf***A9A8A8999FSccmbccccjofklRMMJKJJKLKEEDE44JJHHABDE65444644p7G51328-6953973666578463445OeZOMYpadYAZM -1--OND-VH6EHOHDADA9CE9M9HFCB7656JFI7BA999A9A98ADFFCLGACB888A8522223-2322412311224332345-CB3A4877556718C56-GVPXGRLWPVEGC6FMHejAkC**e4bLeIHEDXDDkQEGCDGWA9*DRMHjFO*CYFPAbRZ*UQOCADEB*8CBGFhVS*8mbCBuagcH ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 291-305| PSIPRED ccccEEEEccEEEEccEEEEEcccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHEEEEEccEEEEEccHHHHHHHHccEEEEEEEccHHHHHHccccEEEEEcccEEEEEEcHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccccccccccc //