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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57335.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  185/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
d.257.1
:157 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->135 1sj5A PDBj 9e-18 35.7 %
:RPS:SCOP  14->135 1vjlA  d.257.1.1 * 1e-10 34.4 %
:HMM:SCOP  1->138 1vjlA_ d.257.1.1 * 1.2e-48 51.4 %
:RPS:PFM   6->136 PF02577 * DUF151 6e-30 55.0 %
:HMM:PFM   4->134 PF02577 * DUF151 2.7e-48 49.6 131/136  
:BLT:SWISS 1->155 Y1829_MYCTU 6e-68 80.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57335.1 GT:GENE BAD57335.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2648774..2649247 GB:FROM 2648774 GB:TO 2649247 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57335.1 LENGTH 157 SQ:AASEQ MSEMRVIGIRVEQPQNQPVLLLREVSGDRYLPIWIGQAEATAIVLEQEGVTPIRPLTHDLIKIMITELGHTLKEVRIVDLQEGTFYADLVFDNDLRISARPSDSVAIALRVGCPIYAEEPVLDEAGLVMPDEREDEVEKFKEFLESVSPDDFKATDS GT:EXON 1|1-157:0| BL:SWS:NREP 1 BL:SWS:REP 1->155|Y1829_MYCTU|6e-68|80.0|155/164| BL:PDB:NREP 1 BL:PDB:REP 9->135|1sj5A|9e-18|35.7|126/143| RP:PFM:NREP 1 RP:PFM:REP 6->136|PF02577|6e-30|55.0|131/137|DUF151| HM:PFM:NREP 1 HM:PFM:REP 4->134|PF02577|2.7e-48|49.6|131/136|DUF151| RP:SCP:NREP 1 RP:SCP:REP 14->135|1vjlA|1e-10|34.4|122/143|d.257.1.1| HM:SCP:REP 1->138|1vjlA_|1.2e-48|51.4|138/151|d.257.1.1|1/1|Hypothetical protein TM0160| OP:NHOMO 219 OP:NHOMOORG 211 OP:PATTERN ----------------1111111111111112-----------1--1-1-111--------------- 11111111111---11111-11111111111111111111111111------111111--11111111111-------1-1-111222111111--1--11111112111---------------111111111111111111-111121111111111111111111111-1-----1-------1111-------------------------------------------------------------------------------------------------------------------------------------1---------------------------1---1----1--1-11111---111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1-111111111--1----1------1-12-------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111------------------------------------1111111111-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----11-------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 80.9 SQ:SECSTR ########EEEcTTTccEEEEEEETTccEEEEEEccHHHHHHHHHHHTTcccccccHHHHHHHHHHHTTcEEEEEEEEEEETTEEEEEEEE#EcccEEEcHHHHHHHHHHHTccEEEEHHHHHHHcEEccHHHHHH##################### DISOP:02AL 1-2, 155-157| PSIPRED cEEEEEEEEEEccccccEEEEEEEccccEEEEEEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHcccEEEEEEEEEEEccEEEEEEEEcccEEEEccccHHHHHHHHHcccEEEEHHHHHHcccccccccHHHHHHHHHHHHcccccccccccc //