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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57336.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  75/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:185 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->97 1r8dB PDBj 4e-04 30.4 %
:RPS:PDB   26->99 3d70A PDBj 2e-13 22.2 %
:RPS:SCOP  26->92 1j9iA  a.6.1.5 * 4e-11 14.1 %
:HMM:SCOP  26->128 1q06A_ a.6.1.3 * 3.5e-13 27.0 %
:HMM:PFM   32->60 PF00376 * MerR 2e-05 34.5 29/38  
:BLT:SWISS 9->156 Y1861_MYCBO 2e-73 89.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57336.1 GT:GENE BAD57336.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2649433..2649990 GB:FROM 2649433 GB:TO 2649990 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57336.1 LENGTH 185 SQ:AASEQ MAEQSQDVVQPGLFPNDAVPDDLVGYRVPSACQVAGITYRQLDYWARTGLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDAGISLQNIRIAVDHLRSRGVEDLAGITLFSDGTSVYECTSPEEVVDLLQGGQGVFGIAVSGAMRELTGVIANFPAERATAATERPEDELAYRRKARMNRATG GT:EXON 1|1-185:0| BL:SWS:NREP 1 BL:SWS:REP 9->156|Y1861_MYCBO|2e-73|89.2|148/225| SEG 157->171|paerataaterpede| BL:PDB:NREP 1 BL:PDB:REP 26->97|1r8dB|4e-04|30.4|69/107| RP:PDB:NREP 1 RP:PDB:REP 26->99|3d70A|2e-13|22.2|72/276| HM:PFM:NREP 1 HM:PFM:REP 32->60|PF00376|2e-05|34.5|29/38|MerR| RP:SCP:NREP 1 RP:SCP:REP 26->92|1j9iA|4e-11|14.1|64/68|a.6.1.5| HM:SCP:REP 26->128|1q06A_|3.5e-13|27.0|100/127|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 75 OP:NHOMOORG 75 OP:PATTERN -------------------------------------------------------------------- --1-111111111111111-1111111111111111111111111111111111111111111111111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 81 STR:RPRED 43.8 SQ:SECSTR #########################EEHHHHHHHHTccHHHHHHHHHTTcccccEEcTTTTTccEEEcGGGGGHHHHHHHHHHHTccHHHHHHHTTccHHHHHHHH############################################################################### DISOP:02AL 1-9, 176-178, 180-185| PSIPRED cccccccHHccccccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHccccEEEEEccHHHHHHHHHcccEEEEEEHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHccc //