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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57339.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  877/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:495 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   17->240 2ix3A PDBj 5e-16 33.9 %
:BLT:PDB   353->389 2zzzA PDBj 6e-04 43.2 %
:RPS:PDB   9->391 3cmvG PDBj 9e-30 11.2 %
:RPS:PDB   416->477 1aroP PDBj 2e-04 6.2 %
:RPS:SCOP  9->233 1b0uA  c.37.1.12 * 1e-27 25.6 %
:RPS:SCOP  338->368 1w1wA  c.37.1.12 * 4e-05 37.5 %
:RPS:SCOP  349->391 1kgdA  c.37.1.1 * 5e-04 13.0 %
:RPS:SCOP  448->482 1f2t.1  c.37.1.12 * 2e-04 26.3 %
:HMM:SCOP  11->233 1ii8.1 c.37.1.12 * 4.9e-52 36.4 %
:HMM:SCOP  345->482 1ii8.1 c.37.1.12 * 1.4e-30 41.9 %
:HMM:PFM   48->183 PF00005 * ABC_tran 5.7e-19 32.7 113/118  
:HMM:PFM   378->450 PF00005 * ABC_tran 8.6e-13 44.4 72/118  
:HMM:PFM   36->55 PF03205 * MobB 0.00042 40.0 20/137  
:HMM:PFM   301->372 PF02689 * Herpes_Helicase 0.00053 30.4 69/817  
:BLT:SWISS 6->486 TLRC_STRFR 8e-79 49.1 %
:PROS 155->169|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57339.1 GT:GENE BAD57339.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2653831..2655318 GB:FROM 2653831 GB:TO 2655318 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57339.1 LENGTH 495 SQ:AASEQ MEHHLTTQLTLRTIEKSYGPRVVLDGVSLSIRPGERVGIVGENGSGKSTLVRIMAGLEAPDDGEVVCSAPGGVGHLAQTLDAETVGAAIDAALADVRELARRMEIAAEAQDMAAYGELLTAFEARDGYEADLRVDQALHGLGLGHLDRDRPLTALSGGERARLALACLLAASPEILLLDEPTNHLDDAALTWLEERLRGHRGTVVVVSHDRVFLDRVATAIVEVADGVVTRFGGGYSGFLAEQAAARQRREQEYARWCAEIERLREFSRDTAHRVAVGRAMRDNNKMAYDRNAGRVQSSVSSRVRQAAEKVRRLEADPVPRPPEPLRFRAGFRAAQPKSFDLGVLTLGPRDRLLIHGPNGAGKSTLLDRLYATAPGRVGYLRQEETFDPEQTVLAAYGRGRAALLATGLFAAETLNVRVGALSEGQRRRLALARLLAGEHDLLLLDEPTNHLSLRLVEELEQALAEYRGAVVVVTHDRGLRRRFRGVQKGVWEFA GT:EXON 1|1-495:0| BL:SWS:NREP 1 BL:SWS:REP 6->486|TLRC_STRFR|8e-79|49.1|481/548| PROS 155->169|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 138->146|lhglglghl| SEG 160->171|rarlalacllaa| SEG 241->253|aeqaaarqrreqe| SEG 295->306|rvqssvssrvrq| SEG 394->415|laaygrgraallatglfaaetl| SEG 427->447|rrrlalarllagehdllllde| BL:PDB:NREP 2 BL:PDB:REP 17->240|2ix3A|5e-16|33.9|189/972| BL:PDB:REP 353->389|2zzzA|6e-04|43.2|37/186| RP:PDB:NREP 2 RP:PDB:REP 9->391|3cmvG|9e-30|11.2|358/1167| RP:PDB:REP 416->477|1aroP|2e-04|6.2|62/774| HM:PFM:NREP 4 HM:PFM:REP 48->183|PF00005|5.7e-19|32.7|113/118|ABC_tran| HM:PFM:REP 378->450|PF00005|8.6e-13|44.4|72/118|ABC_tran| HM:PFM:REP 36->55|PF03205|0.00042|40.0|20/137|MobB| HM:PFM:REP 301->372|PF02689|0.00053|30.4|69/817|Herpes_Helicase| RP:SCP:NREP 4 RP:SCP:REP 9->233|1b0uA|1e-27|25.6|223/258|c.37.1.12| RP:SCP:REP 338->368|1w1wA|4e-05|37.5|31/274|c.37.1.12| RP:SCP:REP 349->391|1kgdA|5e-04|13.0|43/175|c.37.1.1| RP:SCP:REP 448->482|1f2t.1|2e-04|26.3|35/288|c.37.1.12| HM:SCP:REP 11->233|1ii8.1|4.9e-52|36.4|220/370|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 345->482|1ii8.1|1.4e-30|41.9|136/370|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 8544 OP:NHOMOORG 1124 OP:PATTERN 54--131-1111112-7-112-15C3498598112-21332211548323424213-52---1-4--- 57E5W9CACCD798C5744-4G337N444446FGIHLQPN8H7GLLGCFEB7LIG67A22DFGEJGIRNVA7877B8886G99111--6675-6551-145965687938111111122211114344564355668DD96222B545354373745536474694C569314331114133159766431338DDEDECDGDGFEDCF8CDDBAFGE46AE9BB666666GE644444444444444744646385A9654348855AB7346545449898546565777667879769999999999999697666989539887BBBCC8D7B688665787C8323D7623DD574573235421444D-C8AA942322D7PNM656FGHFCEEDEECFCDDX-8AIA7H7ECm52vffWghcsqkniGI577EMRIIJKGFE55555555J5765ABD11--------223334234232332-----37564EFF8FNKLKKLCHHGFEESJJGHGEGOHYFBFD36IIDG9GCBHCJFMV9B86877A67766767864A98B5A5647A6A487427758896688987CJ683642133332211111111132124447A945666659955666AB565658776751-434541--1119ACA68A6777678766-7666666666766666667FGHFG6A97888878787878787H76776665-B8BBDCC99CDD--2311111555545C9D7787763786946587888845557B7AA8ADEEHDEADB7JJI312233331755578888888ABA67643446653333225244334411111111623--1-1-12111--222211-31---3521144241-75 1211445-73315764433554565654444445455544544423244345453453354543534343433544525533333245-3524444333332456615N52353244332334133373JP5-65711--323453331151173322625834341433D3344488D*FDF67C58H467B87555C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 263-312| PSIPRED cccccccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccEEEEccEEEEccccEEEEEccccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHcccHHHHHccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHcc //