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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57341.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.62.1c.94.1
:554 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   364->540 1aoxA PDBj 4e-09 14.6 %
:RPS:SCOP  364->540 1aoxA  c.62.1.1 * 5e-10 14.6 %
:HMM:SCOP  58->330 1atgA_ c.94.1.1 * 2.4e-06 22.9 %
:HMM:SCOP  358->541 1qc5A_ c.62.1.1 * 4.4e-14 24.5 %
:HMM:PFM   364->541 PF00092 * VWA 9.9e-06 13.4 164/179  
:BLT:SWISS 52->198,273->547 Y1836_MYCTU 9e-26 31.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57341.1 GT:GENE BAD57341.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2656165..2657829) GB:FROM 2656165 GB:TO 2657829 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57341.1 LENGTH 554 SQ:AASEQ MGTHRSGTRSRGVSKGPVIAVVAVLLLVAAVFAWFQFRDRAAERDSAAAADCVEGSATVSVTVDPGIEAPVRAIAEKYNATDPQVRDHCVTVTVTAQPSAAVVDAFRAGGPWDSTLGPQPALWIPDSSRSVEAMRVPGLVAGEPSPIAATPVALAVPEPLRAALAQANVAWADLPRLQQGSLDELGLSGWGGLRLALPEGDAALAVATSVAAAVAGEEPLTESGAASGQAVAAVSGLAVGAPDAGDTAAALAAAGGGNAPVHAVAATEQQIAAHPQLTAFRPAGTTPVADHPAALLSGPWVDQTQNLAAGMFVDYLRHPDQAAFFTTAGFTATPAPTGAGADRAALETVRATLDNPVLGVHTTVLVDVSASMATTEGSTTRLANTLGALRSTMTVMPPDFGLGVWTFGKNLDGNRPYEVQAPTGLLTDAQRAAVDQALSSVRATDTRPDQAYPTLLAAYRQAVQNHQAGRTNTVLLVTDGPDDDSAVTGPQLLADLAAAADPARPVRIDVIVVGGAGTDTLQTAAERTGGSYTTVPTSNDLAFGTAMAQALTTT GT:EXON 1|1-554:0| BL:SWS:NREP 1 BL:SWS:REP 52->198,273->547|Y1836_MYCTU|9e-26|31.7|410/100| TM:NTM 1 TM:REGION 14->36| SEG 20->33|avvavlllvaavfa| SEG 38->51|rdraaerdsaaaad| SEG 202->215|aalavatsvaaava| SEG 223->259|sgaasgqavaavsglavgapdagdtaaalaaagggna| SEG 322->341|aaffttagftatpaptgaga| SEG 492->503|lladlaaaadpa| RP:PDB:NREP 1 RP:PDB:REP 364->540|1aoxA|4e-09|14.6|164/201| HM:PFM:NREP 1 HM:PFM:REP 364->541|PF00092|9.9e-06|13.4|164/179|VWA| RP:SCP:NREP 1 RP:SCP:REP 364->540|1aoxA|5e-10|14.6|164/201|c.62.1.1| HM:SCP:REP 58->330|1atgA_|2.4e-06|22.9|218/0|c.94.1.1|1/1|Periplasmic binding protein-like II| HM:SCP:REP 358->541|1qc5A_|4.4e-14|24.5|163/0|c.62.1.1|1/1|vWA-like| OP:NHOMO 38 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ----1---------11111-11111111111111111222---1-----------1----11--1--1-12---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 176 STR:RPRED 31.8 SQ:SECSTR ###########################################################################################################################################################################################################################################################################################################################################################################EEEEccTTcc##HccHHHHHHHHHHHHTTccccTTcEEEEEEEEcccEEccccccEEEEEcTTTcccHHHHHHHHHTccccccccccHHHHHHHHHHHTTcGGGTcccccEEEEEccccccGGGGHHHHHHHHHHTTEEEEEEEEcHHHHHHHHHHHHHTTccccHHHHEEEEccGGH############# DISOP:02AL 1-13, 336-346, 430-432| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccccccEEEEEEEEccHHHHHHHHHcccccccccccccEEEccccHHHHHHHHccccccccccccEEccEEEEEcHHHHHHHccccccHHHHHHHHHccHHHcccccccEEEEcccccccccHHHHHHHHHHHccHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccEEEEcHHHHHHcccEEEEEccccEEcccccEEEEccccccHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccEEEEEcHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccccccHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHccc //