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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57356.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:418 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   15->134 3ba6A PDBj 7e-06 17.1 %
:HMM:PFM   241->289 PF00428 * Ribosomal_60s 0.00058 31.9 47/88  
:HMM:PFM   60->121 PF00557 * Peptidase_M24 0.00031 24.6 61/203  
:HMM:PFM   131->216 PF01210 * NAD_Gly3P_dh_N 0.0006 22.1 86/159  
:BLT:SWISS 75->138 DXS_GLUOX 5e-04 40.4 %
:BLT:SWISS 329->387 PUCR_BACSU 5e-09 42.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57356.1 GT:GENE BAD57356.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2672060..2673316 GB:FROM 2672060 GB:TO 2673316 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD57356.1 LENGTH 418 SQ:AASEQ MAAPTSIEPFLTAAGRPVSTPLKDVRSVARQMVVHFIENVAPCATLPGEALDGDVTTVTRVCLELTRSMLDGRDLPGRVERVQAAAADWAREGIPIDTIHHAVHEGFKLGFDLLIANVTSHDYDTLVGVMRRLMDAQDMITSAVSAAYVRELRAVVSEHHTAVHTLTSALLGGQNTSTMARECGIEVADEYHVVALELPPHAEESTPGLNAKVVARRKLRRVQAELAHRCDGKVLSLLSVDGGTLLLPASAFTANEVDELIGHLSAAAQVPVRAVATTAAPGEIPRAAEQVHELVEIVHRLGEPGKVYRPHELAFEYQLTRPGPARDYLSSVVDSLEAHPELMQTLEVYLATNMQRARTARRLFVHTNTVDYRLKRISQMTGFDLNDVTGLCYLRAALLIRAHRGAGNSEFSPDTRAS GT:EXON 1|1-418:0| BL:SWS:NREP 2 BL:SWS:REP 75->138|DXS_GLUOX|5e-04|40.4|57/100| BL:SWS:REP 329->387|PUCR_BACSU|5e-09|42.4|59/531| SEG 211->222|akvvarrklrrv| SEG 266->281|aaaqvpvravattaap| RP:PDB:NREP 1 RP:PDB:REP 15->134|3ba6A|7e-06|17.1|105/993| HM:PFM:NREP 3 HM:PFM:REP 241->289|PF00428|0.00058|31.9|47/88|Ribosomal_60s| HM:PFM:REP 60->121|PF00557|0.00031|24.6|61/203|Peptidase_M24| HM:PFM:REP 131->216|PF01210|0.0006|22.1|86/159|NAD_Gly3P_dh_N| OP:NHOMO 24 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- ----1---------1---------------------6212---------11---------------1--1---------------------------------------------------------------------------------------------------------------------------1-----1------1--1-11--------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 25.1 SQ:SECSTR ##############cccEEEEGGGc#######cTTcEEEEETTcccc###cEEEEEEEcccccEEEcTTTTccccc#####EEccccccccTTccGGGcTTEEcTTcEEEEcEEEEEEEEcGGGcHHHHccccc############################################################################################################################################################################################################################################################################################ DISOP:02AL 1-4, 402-418| PSIPRED cccccccccccEEccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccc //