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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57359.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  799/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
d.37.1
:354 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   301->343 3hf7A PDBj 4e-06 44.2 %
:RPS:PDB   126->343 3bp1B PDBj 6e-24 7.9 %
:RPS:SCOP  214->343 1yavA3  d.37.1.1 * 1e-15 16.0 %
:HMM:SCOP  211->279 1pvmA2 d.37.1.1 * 2e-07 34.4 %
:HMM:SCOP  285->344 1vr9A1 d.37.1.1 * 4.3e-07 33.3 %
:RPS:PFM   7->200 PF01595 * DUF21 2e-22 42.1 %
:HMM:PFM   7->202 PF01595 * DUF21 1.1e-48 40.3 181/183  
:HMM:PFM   218->277 PF00571 * CBS 4.5e-08 32.7 55/57  
:HMM:PFM   293->340 PF00571 * CBS 2.2e-07 37.5 48/57  
:BLT:SWISS 14->351 Y1841_MYCTU 6e-97 57.9 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57359.1 GT:GENE BAD57359.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2675209..2676273) GB:FROM 2675209 GB:TO 2676273 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57359.1 LENGTH 354 SQ:AASEQ MGDLFGVALTVVLLAGNAFFVGAEFALISARRDRLEALVAQGKRNAMTVIKAGENLSMMLAAAQLGITICSILLGRVGEPAVAHLLEKPFELAGLPDQLLHPVAFALALTIVVILHILLGEMIPKNIALAGPERTALLLVPIHLMFLRLARPLIALYNLAANLSLRMLRIEPKDELDATVSSVELAEMIGESRSEGLLDEEEHRRLTQALGTSERTVADVMVPLATTRSVPLRGNGTTLGDIETAVAETGFSRYPVRASDGSLVGYLHVKDVLDRVADEQAGPNTPIPRTDIRPLPTVGIGTPLVEALARLRRTSSHLGRVVDSRGNTCGIVALEDLVEEFVGTVRDTTHRLSD GT:EXON 1|1-354:0| BL:SWS:NREP 1 BL:SWS:REP 14->351|Y1841_MYCTU|6e-97|57.9|330/345| TM:NTM 4 TM:REGION 6->28| TM:REGION 56->78| TM:REGION 98->120| TM:REGION 142->164| BL:PDB:NREP 1 BL:PDB:REP 301->343|3hf7A|4e-06|44.2|43/127| RP:PDB:NREP 1 RP:PDB:REP 126->343|3bp1B|6e-24|7.9|215/250| RP:PFM:NREP 1 RP:PFM:REP 7->200|PF01595|2e-22|42.1|178/184|DUF21| HM:PFM:NREP 3 HM:PFM:REP 7->202|PF01595|1.1e-48|40.3|181/183|DUF21| HM:PFM:REP 218->277|PF00571|4.5e-08|32.7|55/57|CBS| HM:PFM:REP 293->340|PF00571|2.2e-07|37.5|48/57|CBS| RP:SCP:NREP 1 RP:SCP:REP 214->343|1yavA3|1e-15|16.0|125/132|d.37.1.1| HM:SCP:REP 211->279|1pvmA2|2e-07|34.4|64/78|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 285->344|1vr9A1|4.3e-07|33.3|60/0|d.37.1.1|2/2|CBS-domain| OP:NHOMO 1690 OP:NHOMOORG 831 OP:PATTERN ------------------------53323321-----------12122---11-------------12 1221423655533333333-36--3333333-55555245252553336333756233--444153359931111111112-2112122222-222---211112412-1--------1-----122111222131222121112113323322211-1-11-211323311-11----111-31311----344444443444444442-4435445322224333333343222222222222222122221111221211111222221111121111111111111111111111111111111111111111111111-2223---2222212113312222-122121-13311-11-------11241-2222-1-111232222-2222211111111112-11211411232-311133333322111323142222211333333332332232211111-------22122222222221111-2122112211333333333333333333323333333311333322223211211132212331111111--13331---123313211212121111113333231111111111111111111111-----11332111121214333334644434532313--242221--11123112212212222222-122222222212211211233321222232222222222222222211122--222222212222--31222222222221123333322323212222222222112312222111122221211111-1-11-1122223333312222223333333222221131111111--------312111--------11------1--11111111--11-113 -------------------------------------------------------------------------------------------------------111--1-------------------------------------------------1----------------1---71----3--1-22-11---4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 62.7 SQ:SECSTR #############################################################################################################################TccccccEEEEEEEEEEEEEEcTTccEEEEEEEEEEETTccEEEcHHHHHHHTTTcccccHHHHHHHHHHHHHHHHTcccEEEEEEGGGGTTcccccccEEcccccccEETcccccccGGGGTTcEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHTcccEEEEEEEEcccTTEEEEEEEEccccccccHHTT####### DISOP:02AL 36-46, 173-182, 349-354| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHccEEEEEcccccccEEEEEcccccccHHHHHHHHHHccccEEEEEcccccEEEEEEHHHHHHHHHcccccccHHHHHHHHcccEEccccccHHHHHHHHHHcccEEEEEEEccccEEEEEEHHHHHHHHHcccccccccccc //