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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57360.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  863/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.37.1
:462 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   219->341 3hf7A PDBj 1e-10 28.7 %
:BLT:PDB   359->409 2p3hA PDBj 2e-05 37.3 %
:RPS:PDB   129->341 3bp1B PDBj 6e-33 8.5 %
:RPS:SCOP  215->340 2yzqA1  d.37.1.1 * 2e-21 17.9 %
:RPS:SCOP  361->450 2p3hA1  d.145.1.4 * 1e-09 28.4 %
:HMM:SCOP  215->274 1nf7A3 d.37.1.1 * 1.8e-07 30.5 %
:HMM:SCOP  288->347 1zfjA3 d.37.1.1 * 9.3e-09 31.7 %
:RPS:PFM   20->203 PF01595 * DUF21 1e-15 31.8 %
:RPS:PFM   369->443 PF03471 * CorC_HlyC 4e-04 40.3 %
:HMM:PFM   9->203 PF01595 * DUF21 1.1e-42 30.6 180/183  
:HMM:PFM   356->445 PF03471 * CorC_HlyC 4.5e-25 45.2 73/81  
:HMM:PFM   220->273 PF00571 * CBS 1.9e-08 31.4 51/57  
:HMM:PFM   288->340 PF00571 * CBS 1e-09 34.0 53/57  
:BLT:SWISS 23->444 Y1842_MYCTU e-106 50.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57360.1 GT:GENE BAD57360.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2676266..2677654) GB:FROM 2676266 GB:TO 2677654 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57360.1 LENGTH 462 SQ:AASEQ MSTVLTVLSLIGFIALTAGTALFVAAEFSLTALERSTVEAHAREGDVRARMVRQAHRTLSFQLSGAQLGITITTLITGYIAEPVLARLLRPVFTAVGLGESAAGGISLALALVLATSLSMIYGELVPKNIAIAKPLATARATAGPMVGFSVVFKWMIHFLNGTANWVVRRLGVEPAEELRSARSPQELGSLVRTSAQRGALDQRTAQVMDRSLQFGERSAEELMTPRVKVESLDKDDTIADLLAAAGRTGYSRFPVIDGDLDNTLGVVHIKQAFTQPAAQRRTIPLRLLARPVPVVPASLDGDELLERVRAHGMQVALVVDEYGGTAGLVSMEDLIEEILGDVRDEHDEEERDVRRTADGWDCSGLLRIDEVSRATGYEAPEGEYETLGGLVLTRLGRIPEVGDEVMLPNSPAHHRHPYETEQGGWIARVERMDGRRIDRVRLIPVTAEELVSRTLQEHSHG GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 23->444|Y1842_MYCTU|e-106|50.1|419/455| TM:NTM 3 TM:REGION 6->28| TM:REGION 66->88| TM:REGION 91->113| SEG 68->80|lgitittlitgyi| SEG 97->119|glgesaaggislalalvlatsls| SEG 342->356|dvrdehdeeerdvrr| SEG 387->398|tlgglvltrlgr| BL:PDB:NREP 2 BL:PDB:REP 219->341|3hf7A|1e-10|28.7|122/127| BL:PDB:REP 359->409|2p3hA|2e-05|37.3|51/98| RP:PDB:NREP 1 RP:PDB:REP 129->341|3bp1B|6e-33|8.5|213/250| RP:PFM:NREP 2 RP:PFM:REP 20->203|PF01595|1e-15|31.8|170/184|DUF21| RP:PFM:REP 369->443|PF03471|4e-04|40.3|62/81|CorC_HlyC| HM:PFM:NREP 4 HM:PFM:REP 9->203|PF01595|1.1e-42|30.6|180/183|DUF21| HM:PFM:REP 356->445|PF03471|4.5e-25|45.2|73/81|CorC_HlyC| HM:PFM:REP 220->273|PF00571|1.9e-08|31.4|51/57|CBS| HM:PFM:REP 288->340|PF00571|1e-09|34.0|53/57|CBS| RP:SCP:NREP 2 RP:SCP:REP 215->340|2yzqA1|2e-21|17.9|123/124|d.37.1.1| RP:SCP:REP 361->450|2p3hA1|1e-09|28.4|74/98|d.145.1.4| HM:SCP:REP 215->274|1nf7A3|1.8e-07|30.5|59/0|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 288->347|1zfjA3|9.3e-09|31.7|60/62|d.37.1.1|2/2|CBS-domain| OP:NHOMO 2275 OP:NHOMOORG 899 OP:PATTERN ------------------------533333411----------12122---11-------------12 2221423655533333333-36--3333333-66665355253553437443756233--444253459942222222112-2222123333-322---2231334241122222222222222222111222131222221112224423322222111111321323321121222112223131111--344444443444444442-4435445322224333333343222222222222222222231212222222211222221111121111111111111111111111111111111111111111111111-2223---2222212123312222-122122-13311-11-------112411333211111223333313233311111111112-113115123332322233433322322323253333222333333332332233322222222112222122222222222222-2222223323333333333333333333323333333422223324334322322252323431111111222333222212432223232222222222333333121111111111112111111111--122554233223424444434744444553424--3422211-11155344444434444443-3444444444344444444555444445555445444555555444433442-55555554455512322222233332323333333333332233322222224335333434433333333333332323323144434444433444333333333222221153111111222222223221111-------11------1--1111111111111113 ----------------------------------------------------1-------------------------------------------------------2-------------------------------------------------3----------------1--17111--41-2-21212---3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 264 STR:RPRED 57.1 SQ:SECSTR ################################################################################################################################TcccccccEEEEEEEEEEEEEcTTccEEEEEEEEEEETTccEEEcHHHHHHHTTTcccccHHHHHHHHHHHHHHHHTcccEEEEEEGGGGTTcccccccEEccccccccccccccGGGGTTcEEEEEEEEEEEEEEEEEcccEEEEEEcHHHHHHHHHTTTTccccHHHHHHHHHHHHHHTcccEEEEEEEEcccTTEEEEEEEEcccccccc#################TEEEEETTccHHHHHHHHTccccccccccHHHHHHHHHcccccTTcEEEEE##################################################### DISOP:02AL 39-50, 174-187, 197-199, 445-462| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccEEEEEEEEcccEEEEEcccccHHHHHHHHHHccccEEEEEEcccccEEEEEEHHHHHHHHccccccccHHHHHcccEEEcccccHHHHHHHHHHcccEEEEEEEccccEEEEEEHHHHHHHHHccccccccccHHHHEEccccEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHHccccccEEEEcccccccccccccccccEEEEEEEEcccEEEEEEEEEccccccccccccccccc //