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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57362.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:344 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   96->142 PF00107 * ADH_zinc_N 3e-05 34.0 47/130  
:HMM:PFM   250->330 PF00892 * EamA 0.00065 23.7 76/126  
:HMM:PFM   172->246 PF04695 * Pex14_N 0.00066 22.7 75/136  
:HMM:PFM   25->91 PF05653 * DUF803 0.00016 25.4 67/300  
:BLT:SWISS 45->133 Y250_CORGL 6e-04 34.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57362.1 GT:GENE BAD57362.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2679357..2680391) GB:FROM 2679357 GB:TO 2680391 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57362.1 LENGTH 344 SQ:AASEQ MEHPVWSIVCALAAALLFAVAAVAQQRAAAAVPAGDSLVRTLVRSPRWWAGIVGDGGGYGLQVAALALGPVLLVQPLLVTSLVFALPIAARVDHRTVGRRTWAAALLLLAALGCFLVVGAPTSGNPTAPLRDWAVPSAVLLGAVILAVAAGSRSLTPEPADPARTPCRPPDQPTPRATPPAEPTTRSTGPPPEGSPAAESTPAGTVARSVQRPPPASPRSASRAPLLFGAAGGALFGLAAALTDFVAGRFTHGLGAVLTTWQTWALVAAGVAGVYVQQRAFQVGSIAAALPAATIAEPLAAAFLGLTVLDERLRTDGFGLVVVVASVAVLCVTTVRLAHAQAAE GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 45->133|Y250_CORGL|6e-04|34.8|89/100| TM:NTM 8 TM:REGION 3->25| TM:REGION 63->85| TM:REGION 101->120| TM:REGION 131->153| TM:REGION 223->245| TM:REGION 253->275| TM:REGION 285->307| TM:REGION 317->339| SEG 11->34|alaaallfavaavaqqraaaavpa| SEG 60->79|glqvaalalgpvllvqpllv| SEG 103->112|aaallllaal| SEG 138->151|avllgavilavaag| SEG 168->188|rppdqptpratppaepttrst| SEG 207->242|arsvqrpppasprsasrapllfgaaggalfglaaal| SEG 265->276|alvaagvagvyv| SEG 286->302|iaaalpaatiaeplaaa| SEG 320->335|lvvvvasvavlcvttv| HM:PFM:NREP 4 HM:PFM:REP 96->142|PF00107|3e-05|34.0|47/130|ADH_zinc_N| HM:PFM:REP 250->330|PF00892|0.00065|23.7|76/126|EamA| HM:PFM:REP 172->246|PF04695|0.00066|22.7|75/136|Pex14_N| HM:PFM:REP 25->91|PF05653|0.00016|25.4|67/300|DUF803| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 149-226, 341-344| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccEEHHHHHHHHHHHHHHHHHHHHHHccc //