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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57364.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:313 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   122->270 3c37B PDBj 3e-08 22.0 %
:RPS:PFM   86->194 PF05569 * Peptidase_M56 5e-06 36.5 %
:HMM:PFM   102->193 PF01435 * Peptidase_M48 4.1e-12 23.3 90/225  
:HMM:PFM   219->265 PF10038 * DUF2274 0.00011 43.5 46/69  
:HMM:PFM   46->114 PF02653 * BPD_transp_2 0.00029 29.2 48/267  
:BLT:SWISS 87->210 YHFN_BACSU 7e-04 24.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57364.1 GT:GENE BAD57364.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2682290..2683231) GB:FROM 2682290 GB:TO 2683231 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57364.1 LENGTH 313 SQ:AASEQ MNATAPVFAGLALLLAGPAPALLSRAKWPYRTPRAALVLWQAIALAAVLSAFGSGLAIAAELLVPGPDGRPTTSPTREIDALGFPLWLAYVVVFALTLLVGARLIFSIVRVGVHTRRRRAKHRMLVDLLDQSGPRRRAHDIRVLAATEPIAYCLPGLRQRVVLSEGTLTNLADPEVTAIVSHERSHLRARHDLVLEAFTAVHEAFPRVVRSKAALGSVKLLIELLADDSAVKVTGPAPLARALVACAKSTAPQGALAAGGPTTLIRVQRLGQGGSGDVRIATAAYLGSIAILVVPTLAVAVPWLVELSRLFNS GT:EXON 1|1-313:0| BL:SWS:NREP 1 BL:SWS:REP 87->210|YHFN_BACSU|7e-04|24.4|123/426| TM:NTM 4 TM:REGION 4->25| TM:REGION 39->61| TM:REGION 85->107| TM:REGION 280->302| SEG 9->23|aglalllagpapall| RP:PDB:NREP 1 RP:PDB:REP 122->270|3c37B|3e-08|22.0|141/216| RP:PFM:NREP 1 RP:PFM:REP 86->194|PF05569|5e-06|36.5|96/259|Peptidase_M56| HM:PFM:NREP 3 HM:PFM:REP 102->193|PF01435|4.1e-12|23.3|90/225|Peptidase_M48| HM:PFM:REP 219->265|PF10038|0.00011|43.5|46/69|DUF2274| HM:PFM:REP 46->114|PF02653|0.00029|29.2|48/267|BPD_transp_2| OP:NHOMO 59 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- ----2--1------31111-15111111111131221211-1121--1---1111-----11---111221---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 47.3 SQ:SECSTR #########################################################################################################################HHHHHHHHTTccccccccEEEEEccccccEEEETTccTEEEEEHHHHHHcccHHHHHHHHHHHHHHHTTHHHHHHHHHcHHcHHHHHHHHHcTTccccHHHHHHHHHHHHHHHHTTccTTHHHHHHHH#HHHHHHTccccccHHHHHHH########################################### DISOP:02AL 1-3| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccEEEEEccccccEEEccccccEEEEEHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //