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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57368.1
DDBJ      :             putative iron transporter
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  601/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   63->340 2nq2B PDBj 1e-14 32.1 %
:RPS:SCOP  63->342 1l7vA  f.22.1.1 * 4e-44 28.5 %
:HMM:SCOP  7->343 1l7vA_ f.22.1.1 * 2.8e-71 45.5 %
:RPS:PFM   63->342 PF01032 * FecCD 5e-36 39.4 %
:HMM:PFM   21->342 PF01032 * FecCD 1.5e-87 45.5 310/311  
:BLT:SWISS 58->343 FEPD_ECOLI 5e-35 41.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57368.1 GT:GENE BAD57368.1 GT:PRODUCT putative iron transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2685785..2686831) GB:FROM 2685785 GB:TO 2686831 GB:DIRECTION - GB:PRODUCT putative iron transporter GB:PROTEIN_ID BAD57368.1 LENGTH 348 SQ:AASEQ MTTLGTVRRRRRVGLLALLALLALAALASVALGARAIAPGTVYEAVAHALGCADGPFTCPAASTTEEIVRGLRIPRTALALVAGLALGATGALIQGYTRNPLADAGLLGLNSGAAFLAALSVYLFAFTDPEQYIWFAMAGALLAGLAVFGASSLGGGKASPLSLVLAGAAMTAFLQAMTQAVVLFDATALDTYRFWVVGTVAGRDAAVFWQVLPFIAVGAVLATAAAPGLNLLGLGDDVARGLGMNIARSRALGFTAVVLLCGAATSAVGPIAFLGLVVPHIARAFTGPDHRWLIPYSALLGAVLLLCADTLGRIVARPGELQVGVMLAVVGAPYFIALVRRRKLVSL GT:EXON 1|1-348:0| BL:SWS:NREP 1 BL:SWS:REP 58->343|FEPD_ECOLI|5e-35|41.3|283/334| TM:NTM 9 TM:REGION 14->36| TM:REGION 74->96| TM:REGION 104->126| TM:REGION 134->154| TM:REGION 169->191| TM:REGION 214->236| TM:REGION 259->281| TM:REGION 292->314| TM:REGION 319->340| SEG 2->36|ttlgtvrrrrrvgllallallalaalasvalgara| SEG 77->93|talalvaglalgatgal| SEG 136->157|famagallaglavfgasslggg| SEG 217->236|avgavlataaapglnllglg| BL:PDB:NREP 1 BL:PDB:REP 63->340|2nq2B|1e-14|32.1|265/300| RP:PFM:NREP 1 RP:PFM:REP 63->342|PF01032|5e-36|39.4|279/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 21->342|PF01032|1.5e-87|45.5|310/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 63->342|1l7vA|4e-44|28.5|277/324|f.22.1.1| HM:SCP:REP 7->343|1l7vA_|2.8e-71|45.5|312/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 2120 OP:NHOMOORG 640 OP:PATTERN --1------------------112222212211--11-212111163854D81-2222242-11---- ----23558895531------1---3----------3A24-311123245315312-31123-696226G4--------1221-----2221-222-----11111122----------------13122111223-34221137-5-2222--1--------42--451-------------211--22-158CCDCDCCC7DCDEEC9999AADDE4768654444444HF377777776777777522452-1----2---33-1--2-----1--3222323111111111111112333333333333222111222223A3599998994B52422275625111411-2CA2--312113222-4-21-1--122122221--1344222233233333336-11-11121212-5666343364652-12-14C222231-11111111-33---12----------------------------------22222113314211111111-111111311-1-2--111-1111512--1111-1-151---------1-11-64222123-3111----1---241111-134-252-11112----------11---113321311122-122211111--2-232312---1-1-------D4462754666476742-545266826458644444299A9A4452222222222222222622733353-444444434444--1-----------174B111232--11-1--5--11-11-23213423231522322-465---------16343333338593311---------------111------------4---------------------------1121122222--1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 79.9 SQ:SECSTR ##############################################################ccccccGGGTcHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTTcccHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHTccTHHcccTTHHHHHHHHHccccTTccTTccHHHHHHHHHHHHHHHHHHHHTTTGGGGHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHccccccTTTHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHH######## DISOP:02AL 346-348| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //