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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57370.1
DDBJ      :             putative thioesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  278/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:148 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->133 1vi8G PDBj 1e-18 34.5 %
:RPS:PDB   12->134 3e1eC PDBj 8e-22 19.5 %
:RPS:SCOP  28->138 1zkiA1  d.38.1.5 * 7e-26 25.5 %
:HMM:SCOP  11->146 1o0iA_ d.38.1.5 * 2.4e-30 31.6 %
:HMM:PFM   59->135 PF03061 * 4HBT 8e-17 42.9 77/79  
:BLT:SWISS 28->147 Y1847_MYCTU 3e-33 54.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57370.1 GT:GENE BAD57370.1 GT:PRODUCT putative thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2687886..2688332 GB:FROM 2687886 GB:TO 2688332 GB:DIRECTION + GB:PRODUCT putative thioesterase GB:PROTEIN_ID BAD57370.1 LENGTH 148 SQ:AASEQ MTQQQTPPVQSLAGVTPEMLNEFEQGTFADLLGLRYTELGPDRVRGEFDVQPHLFQPAGIVNGGVYCTVIETLASVAGSVWYGDQGTVVGVNNNTDFLRAVREGLLRGEATPLHRGRLQQLWQVVITDEQERVVARGQVRLQNLPKRD GT:EXON 1|1-148:0| BL:SWS:NREP 1 BL:SWS:REP 28->147|Y1847_MYCTU|3e-33|54.2|120/140| TM:NTM 1 TM:REGION 62->84| BL:PDB:NREP 1 BL:PDB:REP 15->133|1vi8G|1e-18|34.5|119/137| RP:PDB:NREP 1 RP:PDB:REP 12->134|3e1eC|8e-22|19.5|123/141| HM:PFM:NREP 1 HM:PFM:REP 59->135|PF03061|8e-17|42.9|77/79|4HBT| RP:SCP:NREP 1 RP:SCP:REP 28->138|1zkiA1|7e-26|25.5|110/126|d.38.1.5| HM:SCP:REP 11->146|1o0iA_|2.4e-30|31.6|136/0|d.38.1.5|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 346 OP:NHOMOORG 280 OP:PATTERN -------------------------------------------------------------------- -----111111-1221111-11--1111111111111222-------1-111111--1--11--1-11111-----------------11------1--1-11111111----------------11111111111---11---1--------------------------------------1--11---1-1111111111111111------1111-1----1-----------------------------1----1-----11---1-111---------------------------------------------------------------------------1---------------------------1--------------111----------------------------------------1----------------------------------------------------------1-------------------------------------------1111-1111----------------11---1--1--------------------1-----1-----------------------------111-1-----11111111111111111111-------------222212-2222222222-223222222222222222222211111222222222222222212222222--111111111111----11111------------111-11111111------------1111--11-----1-------------111111111111111111111111--------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 146 STR:RPRED 98.6 SQ:SECSTR ##cGGGTccHHcTTHHHHHHHHHTTcHHHHHHTcEEEEEETTEEEEEEEccGGGccTTccccHHHHHHHHHHHHHHHHHTTccTTcEEEEEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEHHH DISOP:02AL 1-11, 147-148| PSIPRED ccccccccccccccccHHHHHHHHHccHHHHccEEEEEEcccEEEEEEEEcHHHHccccEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccccEEEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEccc //