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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57374.1
DDBJ      :             putative hydroxylase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  122/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.32.1
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   78->131 1sqiB PDBj 1e-04 37.0 %
:RPS:PDB   13->251 1cjxA PDBj 2e-13 14.7 %
:RPS:SCOP  1->251 1sp9A  d.32.1.3 * 2e-13 13.9 %
:HMM:SCOP  9->127 2i7rA1 d.32.1.2 * 7.9e-18 26.1 %
:HMM:SCOP  133->258 1xy7A_ d.32.1.9 * 3.2e-11 24.6 %
:HMM:PFM   17->119 PF00903 * Glyoxalase 5e-08 23.3 103/128  
:HMM:PFM   147->254 PF00903 * Glyoxalase 2e-06 20.6 107/128  
:BLT:SWISS 3->257 CF30_MYCTU 4e-18 26.8 %
:REPEAT 2|1->122|127->255

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57374.1 GT:GENE BAD57374.1 GT:PRODUCT putative hydroxylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2690841..2691623) GB:FROM 2690841 GB:TO 2691623 GB:DIRECTION - GB:PRODUCT putative hydroxylase GB:PROTEIN_ID BAD57374.1 LENGTH 260 SQ:AASEQ MTQSGFATGAPCWFDVTSPDIPATAAFYSELFGWKADDLGPEAGHYTILSQDGAPVAGIAPATAPDGSTAPPMWTTYFAVPDAEATVRAAREAGAQVYLEPTDVFGQLTFAVLGDPAGAMYAVAQLVTHPGTARWAEVNNPCWVEYAATGAPADAMAHYARVLGWRHQTAAWETDTVAPYQALAPGAGGREFGGAHAATEGEPAPSWSVTLRVEDCDALAERAVALGGSVVTAAADMPGPSRVGALADPAGATFATMSFG GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 3->257|CF30_MYCTU|4e-18|26.8|250/261| NREPEAT 1 REPEAT 2|1->122|127->255| BL:PDB:NREP 1 BL:PDB:REP 78->131|1sqiB|1e-04|37.0|54/342| RP:PDB:NREP 1 RP:PDB:REP 13->251|1cjxA|2e-13|14.7|238/352| HM:PFM:NREP 2 HM:PFM:REP 17->119|PF00903|5e-08|23.3|103/128|Glyoxalase| HM:PFM:REP 147->254|PF00903|2e-06|20.6|107/128|Glyoxalase| RP:SCP:NREP 1 RP:SCP:REP 1->251|1sp9A|2e-13|13.9|251/362|d.32.1.3| HM:SCP:REP 9->127|2i7rA1|7.9e-18|26.1|115/0|d.32.1.2|1/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| HM:SCP:REP 133->258|1xy7A_|3.2e-11|24.6|122/0|d.32.1.9|2/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| OP:NHOMO 182 OP:NHOMOORG 122 OP:PATTERN -------------------------------------------------------------------- -11-3-111111111--22-21--212222211---2133-111-112----434-12--231-235665------------1---------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1-----------1-1----------11111111111---2--1-1111-111-1111111111-----1----------------221--1-------------------------------1-11---------------------------------------1-----------------------------------------------1-1----------1------------------------------11---------1111211122211212121----------------------------------------------------------------------------------------------------------111--------------------------------------------------------------1----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 97.3 SQ:SECSTR #ccccccEEEEEEEEEEcccTTccHHHHHHTTcEEEEEEccccEEEEEETTEEEEEccccHHHHHHHHHccEEEEEEEEEccHHHHHHHHHHTTcccccccccTTcccccEEEEcGGGcEEEEEccccccccHHHHHEEEcTTcccccTTHHHHHHHHHHHHHccEEEEEEEEEccccEEEEEEEEcTTcccEEEEEEEcTTcccHHHEEEEEccHHHHHHHHHHTTccccccccHHHHHTHHHHcTTccccEE###### DISOP:02AL 1-3| PSIPRED ccccccccccEEEEEEEcccHHHHHHHHHHHcccEEEEcccccccEEEEEcccccccccEEccccccccccccEEEEEEEccHHHHHHHHHHcccEEEEccEEcccccEEEEEEEccccEEEEEcccccccccccccccccEEEEEEEEccHHHHHHHHHHHHccEEEcccccccccEEEEEEEcccccccccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEcccccccccEEEEEEcccccEEEEEEcc //