[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57382.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:559 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   341->546 2hydA PDBj 7e-33 34.0 %
:RPS:PDB   341->546 3b5jA PDBj 1e-43 32.0 %
:RPS:SCOP  358->547 1e69A  c.37.1.12 * 2e-32 17.9 %
:HMM:SCOP  9->336 2hydA2 f.37.1.1 * 2.8e-19 18.3 %
:HMM:SCOP  341->546 1pf4A1 c.37.1.12 * 1.5e-53 34.5 %
:RPS:PFM   382->506 PF00005 * ABC_tran 2e-13 45.0 %
:HMM:PFM   382->505 PF00005 * ABC_tran 1e-22 43.8 112/118  
:HMM:PFM   477->546 PF02463 * SMC_N 2.2e-06 31.4 70/220  
:HMM:PFM   361->400 PF03193 * DUF258 2.2e-06 30.8 39/161  
:HMM:PFM   58->294 PF00664 * ABC_membrane 0.00015 16.7 234/275  
:BLT:SWISS 294->546 Y1384_MYCBO 3e-39 37.9 %
:PROS 478->492|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57382.1 GT:GENE BAD57382.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2697886..2699565 GB:FROM 2697886 GB:TO 2699565 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD57382.1 LENGTH 559 SQ:AASEQ MRGAGALMSPVQRGVVLAGLGAARSRVAAFVAVTALGSTCAIASPLILAGIVQRPDRPATTVAAALAAYAVAVAAARFLYDVRMVLANAVEQRVATTADGTVLRSLLGADGSLAVANNPARIASVVASFHRSNKMLVQILLMAFLGGLFDVALSFLVIGGYVDWTIGAAVAGYGAASVWLTLRANKVTSAYLKRAQHNSDEASNLLGNVLTNLVSLRVFRGIDWVVAANDRYFRRSRQGWTDFYRRRVGFGALQGVLIVVQYVAVFGLLLWREGTAQLAQVVVLVMVLSQLNRPFELIATALREFAVARSMAAPLQDLLDAHAPVQRVGRARVPRDRAFDIVLDDVGYRYRSGAAPTVAGVRAAIEPGRLTFVVGPSGAGKSTLLGILLGTHPGYTGSVRVAGAELADLDLEDYWRLVGYVPQDPMMMNASLRDNVLFGRPGTDAEVLEALRAVELGEWPAELDGGLDYRIGERGSLLSGGERQRLALARALIGAPRLLLLDEPSSALDEQTERSIFERLRAAGREMTIVAVTHRTGLVRDGDHVIHCGAPVAEPALPR GT:EXON 1|1-559:0| BL:SWS:NREP 1 BL:SWS:REP 294->546|Y1384_MYCBO|3e-39|37.9|248/579| PROS 478->492|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 5 TM:REGION 3->24| TM:REGION 30->52| TM:REGION 141->163| TM:REGION 249->271| TM:REGION 279->301| SEG 22->35|aarsrvaafvavta| SEG 59->76|attvaaalaayavavaaa| SEG 167->176|gaavagygaa| SEG 277->291|qlaqvvvlvmvlsql| BL:PDB:NREP 1 BL:PDB:REP 341->546|2hydA|7e-33|34.0|206/578| RP:PDB:NREP 1 RP:PDB:REP 341->546|3b5jA|1e-43|32.0|206/243| RP:PFM:NREP 1 RP:PFM:REP 382->506|PF00005|2e-13|45.0|111/123|ABC_tran| HM:PFM:NREP 4 HM:PFM:REP 382->505|PF00005|1e-22|43.8|112/118|ABC_tran| HM:PFM:REP 477->546|PF02463|2.2e-06|31.4|70/220|SMC_N| HM:PFM:REP 361->400|PF03193|2.2e-06|30.8|39/161|DUF258| HM:PFM:REP 58->294|PF00664|0.00015|16.7|234/275|ABC_membrane| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 358->547|1e69A|2e-32|17.9|190/263|c.37.1.12| HM:SCP:REP 9->336|2hydA2|2.8e-19|18.3|312/0|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 341->546|1pf4A1|1.5e-53|34.5|206/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 41064 OP:NHOMOORG 1174 OP:PATTERN IIA3GC99FGFDFDIBWADDCEFQbHISXMZJF6B986EBC96NTJRfGJvfV7DNEKKGHBA5O156 SShI*YWagghSSNVUXQP-PgCCX*QQQQQPmjkkt***LxS*kxohlaTKuytMUcBBmwtd*f****bYWWWpXZYM*dUA8879NOLF4FBDF--DCNGEDTGTLK633333345455559NOHSYLKTQPNVhhstDCGkRpacjXWeTWUVLELHNIRZTi***QCOGFEECMCFFCaRXIHZS8VRfww*u*w**o***y***qlljk***VXkujeepnnooo**STUVUVUSUUUUTTSPQOJPrfUbrubMeXlomMNz*ZPLPaaYXaccejmflmjifigfdbgkchfTTUTSUUUWWWSTjggUUUhgiYbvkvyuvuz**uWxXbmooNZbXzYXdlyeZNH**hVQRVWOSZUZYGQLZDSSTTKHFFDGVR***ZRiz***sw*y*zv*trx*-jr*hf*o***N8**************IGLzz**s***s*POPPPPPPmOSHOfQs66655444665768AB77986966A4464DDFHC9y**o*s****vhnmoiww**ytwvbx***np*p7FkleuZfgg*n****QceIQHKbREFEEGFDQOIUeXTZ*MZMgbOdiWUYCaXXSPRYOVNNROjsQsFHIKDABBBCA669999999CIABCOMmhfIeJQEOIeNTWXSJQRQOPQPTVWSPS4-EISOK322222tg**Vqdfmmngnlnfg-kfefgfiggilnkccedcf*****efaeiaacccedecbdbad*ZYZbbabM5quxwywuvuwyw33FE8B999IGKJNEocsSPOWVPEJNJILIIUIJLKJDOFFOjWmommnzo*muykoVzz*9BBAACBABGWedtbdbcconmmpPQOJLKIKLMBBBB65LJFF8AAA43322524*9R9785A-6485996CEC67A646446LNXJGViYWU9VH 4498slR-wTBAbmcQVWMSXbYmcnVNNEJHIWXTKPPOMMLHIIXSWihiwmWUZRQNOPOJJBEC3KE9IGNGJ2IJFIFFRQ7A-YpHVPSTLKMPJDMfcT6Y*v*mtg*r*UNNORhT**L*J***3*d*SOPMtPV*lJWNQHrII*RicauQy*Z*ZaQ*ip*wl*hGWQN*FIGTT*ru*N**OP****u ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-3, 5-6, 322-336, 556-559| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEcccccHHHHccccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHccccccccHHHccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccHHHccHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccEEEEcccEEEcccccc //