[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57383.1
DDBJ      :             putative RNA methyltransferase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  108/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:385 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   206->279 1sg9A PDBj 2e-08 37.8 %
:RPS:PDB   147->322 2ar0B PDBj 8e-16 14.5 %
:RPS:SCOP  171->320 1nv8A  c.66.1.30 * 8e-23 29.5 %
:HMM:SCOP  154->322 1o9gA_ c.66.1.29 * 2.2e-31 29.5 %
:RPS:PFM   196->323 PF05175 * MTS 3e-11 43.5 %
:HMM:PFM   205->321 PF05175 * MTS 6.1e-21 37.7 106/170  
:BLT:SWISS 165->323 Y928_METJA 2e-11 29.1 %
:PROS 272->278|PS00092|N6_MTASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57383.1 GT:GENE BAD57383.1 GT:PRODUCT putative RNA methyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2699578..2700735) GB:FROM 2699578 GB:TO 2700735 GB:DIRECTION - GB:PRODUCT putative RNA methyltransferase GB:PROTEIN_ID BAD57383.1 LENGTH 385 SQ:AASEQ MSTISWTEHGTRRTGRWHSENGTPPPARVVVADDRTSAAAALRLARSGTALLWRGDFHNAGNLLRAMGRRLPAPARATPDDLGAHFHAHRRARARRAALLGKVVVAVERDHSVRLRRAPDVRAACRHAYGHLAGEPGAATDTPTVVSLPELLGVVGAYQWHDRGIDIPALGARIHPAYGVFAPTRGEYIDLVARSPLPPGVDHPVVFDIGTGTGVLAAVLAQRGAADVRATDLNPRAVRCARSNLRRLGLDDRVHVAEADLWPAVPAHADLIVCNPPWLPGHPTSALELGVYDPGSAVLDRFLTGLADHLTPQGEGWLILSDLAERLGLRPPDELRARIAAAGLTVVGRAETAPRHPRSTDRADPFHAARSRERTVLWRLRPATP GT:EXON 1|1-385:0| BL:SWS:NREP 1 BL:SWS:REP 165->323|Y928_METJA|2e-11|29.1|151/197| PROS 272->278|PS00092|N6_MTASE|PDOC00087| SEG 27->52|arvvvaddrtsaaaalrlarsgtall| SEG 84->98|ahfhahrrararraa| BL:PDB:NREP 1 BL:PDB:REP 206->279|1sg9A|2e-08|37.8|74/274| RP:PDB:NREP 1 RP:PDB:REP 147->322|2ar0B|8e-16|14.5|172/474| RP:PFM:NREP 1 RP:PFM:REP 196->323|PF05175|3e-11|43.5|124/154|MTS| HM:PFM:NREP 1 HM:PFM:REP 205->321|PF05175|6.1e-21|37.7|106/170|MTS| GO:PFM:NREP 1 GO:PFM GO:0008168|"GO:methyltransferase activity"|PF05175|IPR007848| RP:SCP:NREP 1 RP:SCP:REP 171->320|1nv8A|8e-23|29.5|146/273|c.66.1.30| HM:SCP:REP 154->322|1o9gA_|2.2e-31|29.5|166/0|c.66.1.29|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 137 OP:NHOMOORG 126 OP:PATTERN ----------------------------------1-11111111--1------1--11111-1----- ---------------11----------------1111111---1----------1-----------1-----------1---------------11------------1----------------1-----------11----1---------------------1------------------1--------------------------------1----------------------------------------------11------------------------------------------------------------------------------------------------1----------------------1-----1------------------------------------------------1--1--------------------------------------------------------111-21111111111111111111112212221111111-2121111--11--11--2-111111--1112----------------------1-11112--1-----------------------1-11-----------------1-----1--------1-------------------------------------------------------------------------------------------------------------------------------------111-----------------11------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 72.2 SQ:SECSTR ##########################################################################################################EEEEEEEcHHHHccccccHHHHHHHHHHHHHHcccTTccccccHHHHHHHTTcccccccHHHHHHHHHHHTccccccccHHHHHHHHHHHcccTTcccEEEETTcTTTHHHHHHHHHHHTcEEEEEccHHHHHHHHHHHTTTccccGGGTccEEHHHHTcccEEEEEEccccTTccccccccccccccTcccHHHHHHHHHHHEEEEEEEEEEEEHEGGGGccccTcGGGHHHHHHHHHHcEEEEEEEEcccccTTccEEEEEEEcccccEEEEEHHH# DISOP:02AL 67-79, 384-385| PSIPRED ccEEEEcccccHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHEEEcccccEEEEccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHccHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccccEEEEEccccccccccEEEEEEcccccccccHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEEEccHHHHcccccHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHccHHHHHHHHHccccc //