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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57389.1
DDBJ      :             putative NADH dehydrogenase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  568/915 : Eukaryota  137/199 : Viruses  0/175   --->[See Alignment]
c.143.1c.3.1
:476 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->344 1ebdA PDBj 4e-10 30.1 %
:RPS:PDB   13->388 3dk9A PDBj 2e-25 15.1 %
:RPS:SCOP  9->64 2hzbA1  c.143.1.1 * 3e-13 23.2 %
:RPS:SCOP  88->348 1mo9A1  c.3.1.5 * 4e-18 14.5 %
:HMM:SCOP  7->349 1coyA1 c.3.1.2 * 7.9e-30 27.9 %
:RPS:PFM   13->320 PF07992 * Pyr_redox_2 2e-09 35.0 %
:HMM:PFM   12->323 PF07992 * Pyr_redox_2 2e-33 34.0 188/202  
:BLT:SWISS 10->376 Y2010_STAHJ 4e-36 31.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57389.1 GT:GENE BAD57389.1 GT:PRODUCT putative NADH dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2704526..2705956) GB:FROM 2704526 GB:TO 2705956 GB:DIRECTION - GB:PRODUCT putative NADH dehydrogenase GB:PROTEIN_ID BAD57389.1 LENGTH 476 SQ:AASEQ MSNRTGENRRHQVVVIGSGFGGLFGTKHLKRADVDVTLISKTSTHLFQPLLYQVATGILSVGEIAPATRLVLRKQKNARVLLGEVIDIDLEAKTVTSRLLNQNTVTPFDSLIVATGAQQSYFGNDQFATYAPGMKTIDDALELRGRILGAFEGAELATTQEMRDRLLTFVVIGAGPTGVELAGQIAELADRTLEGTFDNIDPRDARVILIEGAGAVLGPMGPKLGGKAQRRLERMGVEIQLNAMVTDVDAHGVTVKDADGTIRRIESSCKVWSAGVQASPLGKMLAERSAGTEVDRAGRVIVEPDLTIKGHPNVFVVGDLMSVPGVPGQAQGAIQGATYAAKQIKAGLHGQRPEDRKPFKYFNKGSMATVSRFSAVCQIGKLEFGGFIAWLAWLALHLYYLIGYRSRIITCIQWFVTFLGRSRGQMAATEQWVFARLALEQVNEDQADADELAAALGAPPAAGRAPGSKAADQRAS GT:EXON 1|1-476:0| BL:SWS:NREP 1 BL:SWS:REP 10->376|Y2010_STAHJ|4e-36|31.9|348/402| TM:NTM 1 TM:REGION 384->405| SEG 389->401|awlawlalhlyyl| SEG 447->472|adadelaaalgappaagrapgskaad| BL:PDB:NREP 1 BL:PDB:REP 72->344|1ebdA|4e-10|30.1|226/455| RP:PDB:NREP 1 RP:PDB:REP 13->388|3dk9A|2e-25|15.1|331/462| RP:PFM:NREP 1 RP:PFM:REP 13->320|PF07992|2e-09|35.0|260/275|Pyr_redox_2| HM:PFM:NREP 1 HM:PFM:REP 12->323|PF07992|2e-33|34.0|188/202|Pyr_redox_2| RP:SCP:NREP 2 RP:SCP:REP 9->64|2hzbA1|3e-13|23.2|56/311|c.143.1.1| RP:SCP:REP 88->348|1mo9A1|4e-18|14.5|242/261|c.3.1.5| HM:SCP:REP 7->349|1coyA1|7.9e-30|27.9|301/372|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 1359 OP:NHOMOORG 725 OP:PATTERN ---1--121111111---------31121-11----------------1-----------------11 2131421111111124422-221123222221244444A81323112121112211111122112323632-----------2--1--111--1---1111111231211--------------1111221111-22221----113551333123322222223136653-21111121-11111-----233333333333333333223323333222-22122222222222222122222222222222-1-11-1---221122-1-1112221111-------------------------------11---1111---------------1---------------2----1--1-----1----1-11---------13211-11111111111111111-11211112112-1111233111221-----2-1111---22222222-1111-------------------------------------1111124332332111133731111-14231252-1111-31--111-2-22-11111----------111-1------1---111----211---112122------1-------1-------1----2211111--11111111112311122133222-------------21111111111111111-1111111111111-111111111111112111111111111112111111111111111111111---------1111111111111-11111-1---22222-1---1122223121223231111-11-11111-222211111211111111111111--------111111----------------------------------------------12- 1111431-311-1235431344344433333233323444434122444746472334333221123322232223323333322222-45343332323323554-242-------------------------------------------------111-11--------113342Q21124557B2823421221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 444 STR:RPRED 93.3 SQ:SECSTR cTTHHcccccEEHHHHcHHHHHHHHHHHHHHHHHTTTTTTTcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEccEEEccccccEEEccccETTEEEEcccEEEcccEEEccccTTTcTTcGGGcccHHHHTcccccEEEccHHHHHHGGHTccccccEEEEEcccHHHHHHHHHHHHTTccEEEEEcccccHTTcEEEEEcccccccTTccHHHHHHHHHHHHHTTcEEETTEEEEEEEEccccEEcccEEEEEEEEcEEEEcccEEEccTTccGGGTTGTccccTTcccccccTTcccccTTEEEcGGGcTGGcccccHHHHHHHHHHHHHHHHcccTTcccccTTccEEcccccEEEEEccHHHHHHHHcGGGEEEEEEEEccGGGTTTTccTTcEEEEEEEEGGGTTEEEEEEEEEEEEEEccccTTHHHH################################ DISOP:02AL 1-13, 454-476| PSIPRED cccccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccccEEEcccHHHHHcccccHHHHHcccHHHHHHccccEEEEEEEEEEEccccEEEEEEcccccEEEEEEEEEEcccEEcccccccccccccEEccHHHHHHHHHHHHHHHHHHccccccHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEccEEEEEEccccEEEEEEcEEEEEccccccccHHHHHHHHccccccccccEEEcccccccccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccEEEccccEEEEEccccEEEEEccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHHHHccHHccccccEEcccccccccccccccccccccc //