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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57396.1
DDBJ      :             putative nucleoside hydrolase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  232/915 : Eukaryota  21/199 : Viruses  0/175   --->[See Alignment]
c.70.1
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->314 1ezrA PDBj 7e-16 32.4 %
:RPS:PDB   2->337 3b9xB PDBj 8e-41 21.2 %
:RPS:SCOP  4->334 1ezrA  c.70.1.1 * 1e-28 24.5 %
:HMM:SCOP  2->338 1q8fA_ c.70.1.1 * 2.8e-84 40.6 %
:RPS:PFM   3->333 PF01156 * IU_nuc_hydro 1e-22 29.9 %
:HMM:PFM   3->336 PF01156 * IU_nuc_hydro 1.6e-82 38.4 305/313  
:BLT:SWISS 1->338 RIHA_SALNS 6e-19 26.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57396.1 GT:GENE BAD57396.1 GT:PRODUCT putative nucleoside hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2717040..2718107) GB:FROM 2717040 GB:TO 2718107 GB:DIRECTION - GB:PRODUCT putative nucleoside hydrolase GB:PROTEIN_ID BAD57396.1 LENGTH 355 SQ:AASEQ MRQKIIVDVDTGIDDSLALLYLLASPEAEIVGIAATAGNVSAAQVAANNLAWLDVCRAPAIEVALGAAAPLAIPLRTTEDTHGPQGVGYAELPTSARPLSDRSAAQLWVDLARAHPGQITGLCTGPLTNLALALRLEPALPLLLRRLVVMGGAFNHPGNTTPTNEWNVHVDPEAAKAVFDAFSAAPPERRPLICALDITETIEMHPHHLAELARRAGSTPVEQPAPTDPPGTRSTAANPVIRHVTDAVRFYFEFHDAYDQGYLAHMHDPFAAAVALDPALARVRPATVDVELTGTITRATTVADWAGMWGRPFNADIVLGTDPALFFERMIDRVGAYARSLYPPVANLPATQEVP GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 1->338|RIHA_SALNS|6e-19|26.1|310/311| SEG 14->25|ddslallyllas| SEG 58->75|apaievalgaaaplaipl| SEG 130->147|lalalrlepalplllrrl| SEG 174->185|aakavfdafsaa| SEG 268->284|dpfaaavaldpalarvr| BL:PDB:NREP 1 BL:PDB:REP 3->314|1ezrA|7e-16|32.4|281/312| RP:PDB:NREP 1 RP:PDB:REP 2->337|3b9xB|8e-41|21.2|302/303| RP:PFM:NREP 1 RP:PFM:REP 3->333|PF01156|1e-22|29.9|304/312|IU_nuc_hydro| HM:PFM:NREP 1 HM:PFM:REP 3->336|PF01156|1.6e-82|38.4|305/313|IU_nuc_hydro| RP:SCP:NREP 1 RP:SCP:REP 4->334|1ezrA|1e-28|24.5|302/312|c.70.1.1| HM:SCP:REP 2->338|1q8fA_|2.8e-84|40.6|308/308|c.70.1.1|1/1|Nucleoside hydrolase| OP:NHOMO 335 OP:NHOMOORG 264 OP:PATTERN ------2111111-11--------1---1--------------------------------------- ------2122121111111-11--1111111-111111111---1-1--11-223-11-----11-2-1-1-1111---1--1-----------------------------------------------------11111----1-------11------------11----------------1-----------------------1---1-----------------21----------------------2--------2211--21123----1111----------------------------------------------------1-1-1---11------------------------------1111-------------------11111111111----------1--322222232222-----1111111111-----------1--1------------------------------------------1111--------2-1111-11-1--------1--------------------------------------------------------------------------------------------22-1----1---111112211112131121-------------1-11-1-1111111111-1121111121111111111111--22-1111111111111111211-1111------------------------------11--------------1------1-----------------------------------2-----1----22-----111--------------------------------------------------------------- --------21-----------------------------------------------------11----------------------------------------------54122------------------------------------------2----22-----------11------12342-21------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 95.5 SQ:SECSTR ccEEEEEEEcccHHHHHHHHHHHHcTTEEEEEEEEccccccHHHHHHHHHHHHHHTTccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcGGGGGGEEEEEEEcccccccccccccccHHHHTcHHHHHHHHTccccEETccccEEEcHHHHTTccccHHHHHHHHHTTTccHHHHHHHHHHHccHHcHcHHHHHHHHHHHHHHHHHHHHHHcccccccTTHHHHHHHHcGGGEEEEEEcEEEcccccTTTTcEEEcTTcTTcccccEEEEEEEcHHHHHHHHHHHHHTTcc################ DISOP:02AL 350-355| PSIPRED ccccEEEEccccHHHHHHHHHHHHccccEEEEEEEEEccccHHHHHHHHHHHHHHHccccccEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccHHHcccEEEEEccccccccccccccccccEEcHHHHHHHHHccccccccccEEEEEccccccEEEcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcEEEEEEEEEEccccccccEEEEEcccccccccEEEEEEccHHHHHHHHHHHHHHHHHHccccccccccccccc //