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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57397.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  329/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:518 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  9->180 1pw4A  f.38.1.1 * 1e-06 12.9 %
:HMM:SCOP  9->515 1pw4A_ f.38.1.1 * 2.5e-68 33.1 %
:RPS:PFM   97->333 PF07690 * MFS_1 1e-07 32.6 %
:HMM:PFM   27->418 PF07690 * MFS_1 2.5e-48 31.2 343/353  
:BLT:SWISS 18->333 QACA_STAAU 7e-40 34.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57397.1 GT:GENE BAD57397.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2718208..2719764) GB:FROM 2718208 GB:TO 2719764 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD57397.1 LENGTH 518 SQ:AASEQ MDIIGDRLPTAAPARAGRREWIGLAVLALACLVYAMDLTVLHLAVPMISADLHPTGSQLLWIIDIYGFMVAGLLITAGTLGDRLGRRRMLLFGAALFSLVSIVAAFAPSAEILILCRALLGIAGATVAPSTLSLIFDMFADRRQRSLAVGVWVGAFSTGGAVGPIVGGVLLEHFWWGSVFLLAVPVMGLLLVLGPMVLPEYRDPTAGRLDPLSTALCVTTMLAVVFGMKKIAQDGPGVVAVGALGAGLLLGAVFVRRQLTGAAPMLDLRLFRLPTFRYALLINVVGVFVAFGYFLFVAQYLQLVLGLSPWQAGVMMAPSGLAFIVGSQAAPRLVRVVRPAYLVGGGLLTAGIGLLLMTRLAADGGAGLAVAAALISSLGLAPVFGITTEIVVGSAPPQQAGAASGVSETGAELGGALGISILGSISVAIYRGDLNTTLPDGLAPAQRDDVRDTLGAAARVAAELPAATGEAVLTAARAAFLHGVHLTAGLAGVCALVIGVFALRRLRHLPAGELDAGH GT:EXON 1|1-518:0| BL:SWS:NREP 1 BL:SWS:REP 18->333|QACA_STAAU|7e-40|34.8|316/514| TM:NTM 14 TM:REGION 25->47| TM:REGION 57->79| TM:REGION 89->111| TM:REGION 115->137| TM:REGION 148->170| TM:REGION 177->199| TM:REGION 207->228| TM:REGION 243->265| TM:REGION 280->302| TM:REGION 315->337| TM:REGION 340->362| TM:REGION 369->391| TM:REGION 411->433| TM:REGION 478->500| SEG 24->35|lavlalaclvya| SEG 77->96|agtlgdrlgrrrmllfgaal| SEG 181->199|llavpvmglllvlgpmvlp| SEG 237->253|gvvavgalgaglllgav| SEG 342->356|lvggglltagiglll| SEG 360->381|laadggaglavaaalisslgla| SEG 410->429|gaelggalgisilgsisvai| SEG 456->467|aaarvaaelpaa| RP:PFM:NREP 1 RP:PFM:REP 97->333|PF07690|1e-07|32.6|193/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 27->418|PF07690|2.5e-48|31.2|343/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 9->180|1pw4A|1e-06|12.9|170/434|f.38.1.1| HM:SCP:REP 9->515|1pw4A_|2.5e-68|33.1|405/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 800 OP:NHOMOORG 352 OP:PATTERN ------1-1111111------------------111--1--1-211-11--11--------------- 1-11P2243331244-133-36--643333354556B9542636374123114222-3--5832317HHD-----1-----------------1-------1-------1----------------------------------12-------------------------------------1--1----1-244444445-5342444-2212543---22113333331611-------------4--122-2-12--1-122--322-411-1-------------------------------------------------32---1--------33-----------------12---12----------1----------1-1---1----11111111112---1--1---2--111-----1-12---------------11111111-------------------------1-------------1312132333554633222233524545167542-32--311--2--1-1-51-2-----3---------1--------1-1-1-1---------------1---------------------------1------1-1--------------111---------------------1-1211-1111111111-1111--11-111111111-142121331111111111111111411-111---322222222222----11-11-------11----1----------1111111---1-1121-1241--1-1-1-------------------------12--------1-----------11------------------------------------------------- -------------1-----------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-20, 457-463, 508-518| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc //