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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57398.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  333/915 : Eukaryota  141/199 : Viruses  0/175   --->[See Alignment]
c.123.1
:448 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   205->389 2g04A PDBj 3e-17 34.6 %
:RPS:PDB   266->371 2c9eA PDBj 1e-19 10.4 %
:RPS:SCOP  202->391 1xa3A  c.123.1.1 * 4e-38 22.1 %
:HMM:SCOP  32->188 1p5hA_ c.123.1.1 * 1.1e-12 31.2 %
:HMM:SCOP  203->443 1p5hA_ c.123.1.1 * 1e-50 38.6 %
:RPS:PFM   259->382 PF02515 * CoA_transf_3 4e-15 43.5 %
:HMM:PFM   260->396 PF02515 * CoA_transf_3 3.5e-40 41.6 137/191  
:BLT:SWISS 205->382 YFDE_ECOLI 3e-21 33.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57398.1 GT:GENE BAD57398.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2719933..2721279) GB:FROM 2719933 GB:TO 2721279 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57398.1 LENGTH 448 SQ:AASEQ MNAHTRLVHDYESGIGVPASGITDSPDPGSNLAATLPVWALAAGSVAAVAAAANRLRDAHGLAPVPHRIDPERITAAFSSDHLMRVDGRPVTAFADLSGFFPTFDGWVRTHANYPHHRARLLTALGLPEDIPFDIAVAQIAMSRAADIEDNAAAAGAIAVRVRTEQEWAATPQAAAAASGPVVAMEQREDRSGSMMRSEATPFQPLRGVRVLDLTRVVAGPVATRTLALLGAEVLRVDPPWLPELPWQFADTCQGKHSVLLDLRTGSSTFHDLLANADVLVTGYRPGALEQAGLITAVRRGLVHARVCAWGESGPWGDRRGFDSIVQAATGIAVLEGAPQVPGALPAQALDHASGYLLAAGVIDALAARTFDGVGRDVRVSLARTASWLLAAPGRTVKHPPPAAPNPHAVVAHGTLLTAAPALAEYPDYAWPAPQFGSGAPAWPVRTR GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 205->382|YFDE_ECOLI|3e-21|33.7|178/381| SEG 38->53|vwalaagsvaavaaaa| SEG 145->159|aadiednaaaagaia| SEG 169->178|aatpqaaaaa| SEG 397->413|vkhpppaapnphavvah| BL:PDB:NREP 1 BL:PDB:REP 205->389|2g04A|3e-17|34.6|182/353| RP:PDB:NREP 1 RP:PDB:REP 266->371|2c9eA|1e-19|10.4|106/317| RP:PFM:NREP 1 RP:PFM:REP 259->382|PF02515|4e-15|43.5|124/189|CoA_transf_3| HM:PFM:NREP 1 HM:PFM:REP 260->396|PF02515|3.5e-40|41.6|137/191|CoA_transf_3| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02515|IPR003673| GO:PFM GO:0008152|"GO:metabolic process"|PF02515|IPR003673| RP:SCP:NREP 1 RP:SCP:REP 202->391|1xa3A|4e-38|22.1|190/400|c.123.1.1| HM:SCP:REP 32->188|1p5hA_|1.1e-12|31.2|157/427|c.123.1.1|1/2|CoA-transferase family III (CaiB/BaiF)| HM:SCP:REP 203->443|1p5hA_|1e-50|38.6|241/427|c.123.1.1|2/2|CoA-transferase family III (CaiB/BaiF)| OP:NHOMO 2232 OP:NHOMOORG 494 OP:PATTERN --1----121412211-1-211-2---12-31-------------------------------2---- --2341-1---1-16JE44-4E--AQ444447CCDD4GKb-F3L1--2----442211---2B122A6622-111-----316------------------1------12--------------------------54465---12----------------------------------------11---11----------------1--------22313--------1----------------------2------2-1--11--------------------------------------------------------12--1112122-1--3-------1---1----21---------------1--6339-----2-IB9--7B49A533442443442-34A33D39854-4111-222133296462659222426622222222511--723------------------------------35F4-5oXEeDBBDGE5567788FE887858S6RQakb-678563687M8G9OR455----21----------422-121---------------2----111111-2---------------------------1---1-4-3--1---------------------------------2-2--2222222222-122222222212222222-------1-----------------122222221----------------------1111-1212---------------44324242221144443655342455213------------------------------------------1-1111------------------------------------------------- ----111-----1126574555388873311112214666555222324858D8568234333-1---------1------111-1---3545335311-113431-2-23151221-1112222314-8K1-5331-213-2221--1111-5-21252211222-2329-122-1-----------54---111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 188 STR:RPRED 42.0 SQ:SECSTR ##########################################################################################################################################################################################################ccTTTTcEEEEccccTHHHHHHHHHHHTTcEEEEEEcTTccccccGGGcGGTTcEEEEcccTcHHHHHHHHHHHHHHHHTTccTTcccHHHHHHHHcHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHTTcTccccHHHHHHHHHHHHHHHHTccHHHHHHGGHccccEEEEEHHHHHHHHT########################################################## DISOP:02AL 1-2, 188-205, 445-448| PSIPRED ccHHHHHHHHHHHHccccHHHcEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcHHHHHHHHHHHHHccccccccccccccccccccccccEEEccccHHHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHHHccccEEEcccHHHHHccHHHHHHHHccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHccccEEEEEEcccHHHHHHHHHHHccEEEEcccHHHHHHHccHHHHcccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccccHHHHHcccccccccccccccc //