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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57399.1
DDBJ      :             putative thioesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  179/915 : Eukaryota  35/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->250 3flbA PDBj 6e-45 40.7 %
:RPS:PDB   17->251 3bf8A PDBj 3e-18 14.5 %
:RPS:SCOP  18->249 1jmkC  c.69.1.22 * 4e-26 26.5 %
:HMM:SCOP  2->249 1xktA_ c.69.1.22 * 1.3e-49 31.9 %
:RPS:PFM   24->245 PF00975 * Thioesterase 2e-26 42.1 %
:HMM:PFM   23->245 PF00975 * Thioesterase 2.8e-51 34.4 218/229  
:BLT:SWISS 7->249 PABT_STRGR 3e-51 43.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57399.1 GT:GENE BAD57399.1 GT:PRODUCT putative thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2721319..2722077 GB:FROM 2721319 GB:TO 2722077 GB:DIRECTION + GB:PRODUCT putative thioesterase GB:PROTEIN_ID BAD57399.1 LENGTH 252 SQ:AASEQ MERAIAATDWLRELRTDPAPRHHLVCFPPGGGSATAYRDLARRTGPGIAVLGVQYPGRQDRLGEPAVPDLHTLADRIAAELLPQPVDRLALFGHSMGATVAYETARRLTEAGLPLTHLFVSGRPAPTFVEPGRLHQGPDEGLIADLERLATDPSSVAVLRTEPGLADLVLPAVRADYQAVETYTPGGTDPLPCPITALVSTADPTMTPEQGDEWRDFTTGAFRRETFPGGHFYLDEQVAEVAALISSVLAES GT:EXON 1|1-252:0| BL:SWS:NREP 1 BL:SWS:REP 7->249|PABT_STRGR|3e-51|43.8|240/361| BL:PDB:NREP 1 BL:PDB:REP 7->250|3flbA|6e-45|40.7|241/245| RP:PDB:NREP 1 RP:PDB:REP 17->251|3bf8A|3e-18|14.5|234/255| RP:PFM:NREP 1 RP:PFM:REP 24->245|PF00975|2e-26|42.1|214/219|Thioesterase| HM:PFM:NREP 1 HM:PFM:REP 23->245|PF00975|2.8e-51|34.4|218/229|Thioesterase| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00975|IPR001031| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00975|IPR001031| RP:SCP:NREP 1 RP:SCP:REP 18->249|1jmkC|4e-26|26.5|200/222|c.69.1.22| HM:SCP:REP 2->249|1xktA_|1.3e-49|31.9|235/0|c.69.1.22|1/1|alpha/beta-Hydrolases| OP:NHOMO 410 OP:NHOMOORG 214 OP:PATTERN -------------------------------------------------------------------- 1-1-8---------41222-23113122222232222-32-421-----1----------22--316A371------------------------------1---3--------------------------------------4-121-11--------------42152----------------------2-----1-1--1-11--11121--2---1---------2----------------------------------------------------1--11-------------------------------------11----1-----2-33-------1------111----------------1-------------2----2-----------------2-1----1---111---------2--------------------------1------------------------------------------11212362211----66661711-1-1-----1--1--1---1-------------------1----------11-------------------33----------------------------------2----------1--------------------------3-2-------2-221---------1-11-11--------1--221----------------1---------122222111121-----1---------4-1---------------11121-----1335452321-1111-432-------------1-----1---------------------------------------------------------------------------1- ---------------------------------1-1------------------------------------------------------------------------4-522111211-1-1-21-2-422-21--1-1----------2--1-1--1----11--------1------211---------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 100.0 SQ:SECSTR ccEEEEcccccEEEcccccccccEEEEccTTccTTTTHHHHHHHTTTccEEEEccTTcTTcccccccccHHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEccccccccccccHHHHHHHHHHHHcccccHHHHHHHHTTTcccHHHHHHHHTTEETTEEcccHHHcccccccccccEEEEccTTccTTcGGGHHHHHHHcTTEEEcccTTccccHHHHcHHHHHHHHHHHHHTc DISOP:02AL 1-2| PSIPRED ccccccccccEEEEccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEccccccHHccHHHHHHHHHHHHHHc //