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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57402.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:238 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   108->205 1uscA PDBj 2e-07 32.0 %
:RPS:PDB   98->234 3bnkB PDBj 3e-21 18.2 %
:RPS:SCOP  98->205 1wgbA  b.45.1.2 * 1e-23 26.9 %
:HMM:SCOP  74->240 1uscA_ b.45.1.2 * 4.3e-34 29.5 %
:RPS:PFM   98->214 PF01613 * Flavin_Reduct 2e-07 32.5 %
:HMM:PFM   92->214 PF01613 * Flavin_Reduct 9.8e-26 31.7 123/155  
:BLT:SWISS 106->205 NTAB_CHEHE 4e-06 26.8 %
:BLT:SWISS 182->234 MIAA_SALTO 9e-04 34.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57402.1 GT:GENE BAD57402.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2724026..2724742 GB:FROM 2724026 GB:TO 2724742 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD57402.1 LENGTH 238 SQ:AASEQ MSSRGGPDQRLWQSLPSPPIRSASVRWTGRPSVGPRDGAHGSPPTVARATRGRDRRDGYARPRRDEGEEGTVVVARQGVEEAFDAVVAAADYPVWVVTTVADGVRAGCLVGFGTQVSIEPRRFLVGLSKKNHTYRVAADAEYLAVHLLASGQQALARLFATESGDTVDKFAHCAWTPGPHEVPVLTGASGWFAGRILERHDFGDHCGLLLEPLAGRAPVAGPALRYDRVAGLRPGHEA GT:EXON 1|1-238:0| BL:SWS:NREP 2 BL:SWS:REP 106->205|NTAB_CHEHE|4e-06|26.8|97/322| BL:SWS:REP 182->234|MIAA_SALTO|9e-04|34.0|53/100| SEG 47->65|aratrgrdrrdgyarprrd| SEG 79->97|veeafdavvaaadypvwvv| BL:PDB:NREP 1 BL:PDB:REP 108->205|1uscA|2e-07|32.0|97/178| RP:PDB:NREP 1 RP:PDB:REP 98->234|3bnkB|3e-21|18.2|137/187| RP:PFM:NREP 1 RP:PFM:REP 98->214|PF01613|2e-07|32.5|117/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 92->214|PF01613|9.8e-26|31.7|123/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 98->205|1wgbA|1e-23|26.9|108/159|b.45.1.2| HM:SCP:REP 74->240|1uscA_|4.3e-34|29.5|166/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 40 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- --------------11111-11--1-11111-1---1-31-1-1--------2------------1-121-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------1-------------------------------------1--1-------------------2-------------------------------------------------------------------------------1-1-----------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------1----------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 137 STR:RPRED 57.6 SQ:SECSTR #################################################################################################EEEETTEEEEEEEccEEEEETTTTEEEEEEETTccHHHHHHHHcEEEEEEccGGGHHHHHHHTTccTTTcccTTcccEEccTTcccEETTccEEEEEEEEEEEEcccEEEEEEEEEEEEccGGGEETTEEcHHHHcc#### DISOP:02AL 1-10, 35-44, 233-238| PSIPRED ccccccccHHHHHccccccccccEEEccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccEEEEEEEEEEEEEEEcccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHcccccccHHHccccccEEccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccEEEcccccccccccc //