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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57406.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  198/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->281 2r9lB PDBj 1e-33 31.6 %
:HMM:PFM   136->256 PF01896 * DNA_primase_S 5.8e-11 19.0 121/145  
:BLT:SWISS 15->281 Y963_MYCBO 4e-33 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57406.1 GT:GENE BAD57406.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2727596..2728597) GB:FROM 2727596 GB:TO 2728597 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD57406.1 LENGTH 333 SQ:AASEQ MSGPTLEVEVDGRVLAISNPDKVYFTKRGETKADLVRYYQAVAEPLLGVIRDRPLLLERHPDGASGKSWFQKRVPKSAPDWLHTVEVTTPNGTTSDALVAHDLAHILWAVNQGCLGFHVWPNRVRDLTVADELRIDLDPSPGIGYPDLVRAAKLTRGLFDELGIASAVKTSGSRGLHIYVALEPRWDGYQVRAAAVALARELERRHPDLITAHWWKEERGQRVFVDYNQNAPHKTVFGAWCVRPKVGAQVSTPISWDDLDSVVPDDLTIATVPARLAERGDPWADRAPQSIEPLLAMSERDMAAGLMDAPWPPQYPKMPNEPPRVQPSRAKKQ GT:EXON 1|1-333:0| BL:SWS:NREP 1 BL:SWS:REP 15->281|Y963_MYCBO|4e-33|31.6|266/759| SEG 191->205|vraaavalarelerr| BL:PDB:NREP 1 BL:PDB:REP 15->281|2r9lB|1e-33|31.6|266/282| HM:PFM:NREP 1 HM:PFM:REP 136->256|PF01896|5.8e-11|19.0|121/145|DNA_primase_S| OP:NHOMO 335 OP:NHOMOORG 199 OP:PATTERN -------------------------------------------------------------------- 113-3---------33333-34--343333334444423321--2412-1--333-----444-114232----------1------------------2-1-1-312-1--------------1------------------------------------------------------------------1-1---------------111111------11--------11---------------------------------------------------------------------------------------------------------1-------1----1--1111-1111122----------1--2-----2111221111111----------1------1--231-12222331322411-----11111------------11-----------------------------------112---1--1111-111----11131111---21221---11--111-1-1-2----1--1-----------111-1--------------111---1--3363-1---------------------------------------------------------------------------------------------------------------------------------------------------------------1-111---1--------------------------------11111-11111112111------------------------2112122----------------------------------------------------------------1- ------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 82.0 SQ:SECSTR ##############cccccTTcEEETTTTEEHHHHHHHHHHHHHHHHHHHTTcccEEEEcTTcTTcccEEEccccTTccTTcEEEEEEETTEEEEEEEccccHHHHHHHHHTTccEEEEccEEEEEcTTTccEEEEEEEcTTccHHHHHHHHHHHHHHHHHTTcccEEEEcccccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHcTTTEEccccGGGTTTcEEEEcGGGcTTccEEcTTccccccccEEcEEccHHHHTcTTcccEEHHHHHHHHHHHccTTTTTT############################################## DISOP:02AL 1-9, 316-333| PSIPRED ccccccccEEcccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccEEEEEccccccccccEEEEEEcccccccccEEEccHHHHHHHHHccEEEEEcccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEEcccccEEEEEccccccccccEEEEEEHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccc //