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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD57409.1
DDBJ      :             putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  47/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:570 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   134->387 1bucA PDBj 3e-11 23.0 %
:RPS:PDB   13->391 1bucA PDBj 4e-26 20.9 %
:RPS:SCOP  8->210 1rx0A2  e.6.1.1 * 2e-10 13.8 %
:RPS:SCOP  242->392 1siqA1  a.29.3.1 * 2e-10 15.0 %
:HMM:SCOP  11->238 1bucA2 e.6.1.1 * 4.3e-20 21.7 %
:HMM:SCOP  239->393 1bucA1 a.29.3.1 * 6e-19 19.2 %
:RPS:PFM   240->314 PF00441 * Acyl-CoA_dh_1 2e-04 26.7 %
:HMM:PFM   242->384 PF00441 * Acyl-CoA_dh_1 1.1e-14 20.4 137/150  
:HMM:PFM   134->184 PF02770 * Acyl-CoA_dh_M 6.5e-10 34.0 50/52  
:BLT:SWISS 134->389 ACDSB_DICDI 8e-11 24.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57409.1 GT:GENE BAD57409.1 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2730303..2732015) GB:FROM 2730303 GB:TO 2732015 GB:DIRECTION - GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD57409.1 LENGTH 570 SQ:AASEQ MPLFNPTTDTFAEFDPKTRELLTALVDFFERKGKQKLTADTHRAEWYDDWMAFLAESRILAYMATPKAYAGGDPDKRWDTAFISKFNEITGFYGAQYWYAWGVSTLGLATIWQSDNAEAHARAAAELDRGGIIAFGLSEKDHGADIYATDMLLTPDGAGGFTATGGKYYIGNGNVARLVPTLGRRTDIEGPDAYVWFLADSQHPNYTLVKNVIHGQNYVSAYDLVNYPVRAQDVLHTGRRAFDVALAAVNCGKFNIGMVTLGIVQHSFYETINQAHGKILFGHPVTDFGQVRQILSDAYVRITAMKLYHERAIDYMRCSSQEDRRFVLFNSIGKMKVTREGERVFRELSDVISAKGFEKDTYFSMARGIIDSMPRLEGTAHVNMALTLKFMTSFLYNPAELPPVPVRRDPGDDEALFRQPGAAGLSKVRFADWRIPFRRFEHLPNVALFLAQAERFVQFPVQAPMTDAQLADLDFQLAVGELFTLLPYGQLIVEQAALAGTAEELVDAIFEVLVRDFAGYALGIFTKPSSTPAQQDWALAALAKPVSDPERARRLYAEVLGYAGSYEMAP GT:EXON 1|1-570:0| BL:SWS:NREP 1 BL:SWS:REP 134->389|ACDSB_DICDI|8e-11|24.8|250/413| SEG 117->126|aeaharaaae| SEG 402->413|ppvpvrrdpgdd| BL:PDB:NREP 1 BL:PDB:REP 134->387|1bucA|3e-11|23.0|248/383| RP:PDB:NREP 1 RP:PDB:REP 13->391|1bucA|4e-26|20.9|373/383| RP:PFM:NREP 1 RP:PFM:REP 240->314|PF00441|2e-04|26.7|75/150|Acyl-CoA_dh_1| HM:PFM:NREP 2 HM:PFM:REP 242->384|PF00441|1.1e-14|20.4|137/150|Acyl-CoA_dh_1| HM:PFM:REP 134->184|PF02770|6.5e-10|34.0|50/52|Acyl-CoA_dh_M| GO:PFM:NREP 2 GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 8->210|1rx0A2|2e-10|13.8|196/231|e.6.1.1| RP:SCP:REP 242->392|1siqA1|2e-10|15.0|147/154|a.29.3.1| HM:SCP:REP 11->238|1bucA2|4.3e-20|21.7|226/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 239->393|1bucA1|6e-19|19.2|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 57 OP:NHOMOORG 53 OP:PATTERN ------------------1----11------------------------------------------- 1---1---------21111-11--1-1111111---2211----------------1-------1-11-1--------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------1-------------------------------------------------111-----1111----------------------1-------------------------121-----------111---1-----------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------- ----11--------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 539 STR:RPRED 94.6 SQ:SECSTR #cccTTTccccccccHHHHHHHHHHHHHHHHTTTTTHHHHHHHTcccHHHHHHHHTTcGGGTTTccGGGTTcGGGGTccHHHHHHHHHHHHHHcHHHHHHHHHHHHTHHHHHHHccHHHHHHTHHHHHHTcccEEEcccTTccccGGGcccEEEEcTTccEEEEEEEEEEETTTTccEEEEEEEccccccTTcEEEEEEETTcTTEEEEEEcccccTTccEEEEEEEEEcGGGEEccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEETTEEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGcTTccHHHHHHHHGGGGTTTccHHHHHHHHHHHHHHHHHHHH##############HTccccGGGGGGGGcccccTTcHHHHHHHHHHHHHHHHHH###HHHHHHHHHHHHccHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGGcccHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTcccHHHHHHH##HHHHHHHHHHH########### PSIPRED ccccccccccHHHccHHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEEEcccccccccHHHcEEEEEEccccEEEEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccEEEEcccccccccccEEEEccEEccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccc //